Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151414g00002 ATGGAGAATAATAATAACGAGGTTGTTCTTCTGGATTTGTGGGCGAGCATGTTTGGCATGAGGGTCCGAATTGCACTTGCAGAAAAGGGTGTAAAGTACGACTACATTGAACAAGATATATGGAACAAGAGCGATCTGCTTCTTCAAACGAACCCGGTTCACAAGAAAGTGCCTGTTCTAATCCACAAAGGCAAACCCATCTGTGAGTCTCTCATCGCTGTTCAGTACATTGATGAGGTCTGGAATGATAGATCTCCACTCCTACCTTCTGACCCTTATGAAAGATCCCAGGCTAGGTTCTGGGCTGATTATGTTGACAAGAAGATATATGACCTTGCAAAGAAGGTGTGGGCAAGAAAAGGAGAAGAGCAAGAAGCTGGAAAGAAAGAATTCATTGAAGCCCTTCAATTGTTGGAGGCAGAGCTAGGAGAGAAACCCTTTTTCGGTGGGGACAAGTTTGGTTTCGTAGATATTTCACTTGTCACATTTTATAGCTGGTTTTATGCAGTCGAGACCATTGGCAACTTCAGCATAGAGTCTGAATGTCCCAAGTTCATTTCCTGGGCCAAGAGGTGTCTGCAGAAAGAGAGTGTTTCTAGTACTTTACCAAACTCAAAAAGGGTCTATGAATTCCTTTTGGATGCTAAGAAGAGGCTCGGCATTGAGTGA 669 0.4335 MENNNNEVVLLDLWASMFGMRVRIALAEKGVKYDYIEQDIWNKSDLLLQTNPVHKKVPVLIHKGKPICESLIAVQYIDEVWNDRSPLLPSDPYERSQARFWADYVDKKIYDLAKKVWARKGEEQEAGKKEFIEALQLLEAELGEKPFFGGDKFGFVDISLVTFYSWFYAVETIGNFSIESECPKFISWAKRCLQKESVSSTLPNSKRVYEFLLDAKKRLGIE 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151414g00002 222 SUPERFAMILY GST C-terminal domain-like 79 217 IPR036282 -
Stsc151414g00002 222 SFLD Glutathione Transferase (cytosolic) 4 219 IPR040079 -
Stsc151414g00002 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Stsc151414g00002 222 CDD GST_N_Tau 8 81 - -
Stsc151414g00002 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 211 IPR010987 -
Stsc151414g00002 222 CDD GST_C_Tau 92 214 IPR045074 GO:0004364|GO:0006749
Stsc151414g00002 222 SFLD Main.3: Omega- and Tau-like 4 219 IPR045073 -
Stsc151414g00002 222 FunFam Tau class glutathione S-transferase 1 90 - -
Stsc151414g00002 222 SUPERFAMILY Thioredoxin-like 7 109 IPR036249 -
Stsc151414g00002 222 Pfam Glutathione S-transferase, N-terminal domain 9 79 IPR004045 -
Stsc151414g00002 222 Gene3D - 91 222 - -
Stsc151414g00002 222 FunFam Glutathione S-transferase U20 91 222 - -
Stsc151414g00002 222 Pfam Glutathione S-transferase, C-terminal domain 125 191 - -
Stsc151414g00002 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 210 IPR045073 -
Stsc151414g00002 222 Gene3D Glutaredoxin 4 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151414g00002 Stsc-Chr151414 6119 9997 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151414g00002 6 222 Glutathione S-transferase Gene Family AT1G17180 63.134 2.86e-110 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151414g00002 K00799 - cave:132190646 343.969