Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151414g00001 ATGGCTGACGAAGTAGTTCTACTAGATTTCTGGCCAAGCCCATTCGGCATGAGGGTCAGAATAGCTTTGGCTGAAAAGGGGATCCAGTATGAGGGAAGAGAAGAAGACTTGAGCAATAAGAGTCCCTTGTTGCTGAAGATGAACCCAGTCAACAAGCAAATCCCTGTTTTGATTCACAAGGGAAGACCAATCTGTGAATCACTCATCATTGTTCAGTACATTGATGAGGTTTGGAGCAATAACAAGAATTTGCTTCCCTCTGATCCTTATCAGCGAGCCAATGCAAGGTTTTGGGCTGATTATATTGACAAAAAGATTTACTCAACGGGGAGATTGGTGTGGGGAACAACAGGGGAGGTTCAAGAGAAAGCAAAGAACGAGTTGAGAGAGAGCTTTAAGCTGCTTGAAAATGAGTTAGCAGAAAAGAGTTATTTTGGGGGAGACATGTTTGGTTTGGTTGATGTGGCTCTCATTCCCTTCTACAGCTGGTTCTACACTCTTGAGACCACTGCCAATTTCAGCATCACTGAGGAGTTTCCCAGGCTTGTGTCTTGGGCCAAGCGTTGCATGCAGAGGGATAGCGTTTCAAAGTCTGTTCCTGATCAGTACAAAATCTATGACTTCCTTTTGGACCTTAAGAAGCAGATGCACTGA 654 0.4434 MADEVVLLDFWPSPFGMRVRIALAEKGIQYEGREEDLSNKSPLLLKMNPVNKQIPVLIHKGRPICESLIIVQYIDEVWSNNKNLLPSDPYQRANARFWADYIDKKIYSTGRLVWGTTGEVQEKAKNELRESFKLLENELAEKSYFGGDMFGLVDVALIPFYSWFYTLETTANFSITEEFPRLVSWAKRCMQRDSVSKSVPDQYKIYDFLLDLKKQMH 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151414g00001 217 Pfam Glutathione S-transferase, C-terminal domain 119 193 IPR004046 -
Stsc151414g00001 217 SUPERFAMILY GST C-terminal domain-like 76 214 IPR036282 -
Stsc151414g00001 217 Gene3D Glutaredoxin 1 87 - -
Stsc151414g00001 217 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Stsc151414g00001 217 CDD GST_N_Tau 5 78 - -
Stsc151414g00001 217 SFLD Glutathione Transferase (cytosolic) 2 216 IPR040079 -
Stsc151414g00001 217 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Stsc151414g00001 217 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Stsc151414g00001 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Stsc151414g00001 217 FunFam Glutathione S-transferase U20 88 217 - -
Stsc151414g00001 217 FunFam Tau class glutathione S-transferase 1 87 - -
Stsc151414g00001 217 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 207 IPR045073 -
Stsc151414g00001 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Stsc151414g00001 217 Gene3D - 88 217 - -
Stsc151414g00001 217 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151414g00001 Stsc-Chr151414 3544 5509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151414g00001 1 216 Glutathione S-transferase Gene Family AT1G17180 60.185 2.38e-100 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151414g00001 K00799 - twl:119982746 354.755