Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151413g00003 ATGGTTTCATCACCCTCAATTCATGAGAAGTTGAAGGGGTTTGTAAGGCACAAATGGTTTGTATTTGTGTGTTCGATGTGGGACTTGTCATTTGCAGGGACAGCATACATGTTTGGGAGCATTTCACCAGTGATCAAGACCAACATGAGATACAACCAGCATCAGGTGGCGCTCTTGAGTGTCGCCAAGGATCTCGGGGACAACGTTGGCCTTATCGCCGGCAAGCTCAGCGAGTCGTCGCCGATGTGGGTGGTTATACTTCTTGGGGCGTTCCAAAATGTTGTTGGTTATGGCCTTCTTTGGCTTGTGGTCACTCACAGGCTTCCTTCCTTGCCTTTGTGGATGTTATGTATATTTATCTTGGTGGGACAAAATGGATCAACATATTACAACACAGCCTCAATAGTTTCTGGTGTTCGGAACTTCCCTGAAAACAGAGGACCCGTCGTAGGCATCTTGAAGGGCTTCATCGGCCTAAGCGGCGCCATATGGACGCAAATCGTCGCCGCCATCAACTTCCCCTACCACTCATCTCTCATCCTCGTCGTCGCCGTTGGACCCGCCGCGGTCTCCTTGCTAACCATGTTCATCATAAGACCCCTCAAACATTCCTTCAAGCAATCTACACCGTCCGATGATAATTCCGGGTTCAATTTTATCTACGGCGTTTCCGTTCTCTTGGCTGCTTACCTTCTCAGCATTTTGTTGTTACAAAACATGTTGGATTTGGACCATGAAACCGTCACATTGTTGGCAATTGTTTTGATCATTCTATTGTCTCTTCCGATTTTGGTTCCTATTGTAATGGTTTTCTTCTTAGAACCCAAAAGAAGTGTTGATGATGACCAAGAAAGTGAAGCATTGTTTCTTGTTGAACAATCTATGGACATGCATGGGGAAGATGATGGTGATGATGAATCTCGTGCTACTAATAATTCTACGGATCATGTTGATGAAGATGATGATAATGATCATAAGCCTTCAGAAATGTCTGCTGGAGTTTCAAGGTCAAGGGGCATTATGGTCCAATCAGATGCTAATAAATTTATGGAAGGAATAAAGAAAATGATGAAGAATAATAATGGTAGGAGAATAGGAGAGGAATTCAGCATAAGAGAAGCAGCTGTTAATGGTGAGTTATGGATAATGTTCTTGTCCCTAACCATGAGTGGTGGATCTGGGTTGACGGTTATAAACAACATTGGTCAGATGTGCCAATCAGTGGGAGACAACAATGTCAATGTCTATGTTTCAGTGCTTAGTATATGCAATGCCCTTGGTCGTGTTGCTGGTGGCTACTCCTCAGAGCTTATAGTAAGAAAATTTGGGCATTCAAGACTTGTTGCATTGGTTGTGGTTCAGGGAATGATGGCATTGGGTCTCTCCTACTATGCCATGGGTTTAGTTGGTCAAATCTATGTAGTAGCCACAACTATGGGTTTTGGCTATGGTGCACACTGGTCAATTGCCATAGCTACAGCTTCAGAGCTATTTGGATTGAAGAACTTTGGGACCATATTCAATTTTCTTGCAATGTCTTGTCCTGCTGGAACCCTAATCTTGTCTGGATTTGTAGCAAGCACAATATATGACTACTATGCTGCACAGCAACAAAGAAATGATGATGAAGAGTTGTTGCTTGTTTGTGAAGGAAACATATGCTTTTCTTTGACATGTTGGATCTTAGCAATAGTTTGCATAATAGCTGCTGTTTTGAACATGACCTTGGTTTACAGGACTAAGATGTTGTATGCTCAAATTTATAGAAAGTCTATAATAATCTAA 1785 0.4263 MVSSPSIHEKLKGFVRHKWFVFVCSMWDLSFAGTAYMFGSISPVIKTNMRYNQHQVALLSVAKDLGDNVGLIAGKLSESSPMWVVILLGAFQNVVGYGLLWLVVTHRLPSLPLWMLCIFILVGQNGSTYYNTASIVSGVRNFPENRGPVVGILKGFIGLSGAIWTQIVAAINFPYHSSLILVVAVGPAAVSLLTMFIIRPLKHSFKQSTPSDDNSGFNFIYGVSVLLAAYLLSILLLQNMLDLDHETVTLLAIVLIILLSLPILVPIVMVFFLEPKRSVDDDQESEALFLVEQSMDMHGEDDGDDESRATNNSTDHVDEDDDNDHKPSEMSAGVSRSRGIMVQSDANKFMEGIKKMMKNNNGRRIGEEFSIREAAVNGELWIMFLSLTMSGGSGLTVINNIGQMCQSVGDNNVNVYVSVLSICNALGRVAGGYSSELIVRKFGHSRLVALVVVQGMMALGLSYYAMGLVGQIYVVATTMGFGYGAHWSIAIATASELFGLKNFGTIFNFLAMSCPAGTLILSGFVASTIYDYYAAQQQRNDDEELLLVCEGNICFSLTCWILAIVCIIAAVLNMTLVYRTKMLYAQIYRKSIII 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151413g00003 594 SUPERFAMILY MFS general substrate transporter 17 582 IPR036259 -
Stsc151413g00003 594 MobiDBLite consensus disorder prediction 298 331 - -
Stsc151413g00003 594 Pfam Nodulin-like 18 267 IPR010658 -
Stsc151413g00003 594 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 19 585 - -
Stsc151413g00003 594 MobiDBLite consensus disorder prediction 298 337 - -
Stsc151413g00003 594 CDD MFS_Mch1p_like 17 570 - -
Stsc151413g00003 594 Gene3D MFS general substrate transporter like domains 213 581 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151413g00003 Stsc-Chr151413 7166 12798 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151413g00003 8 590 Nodulin-like Gene Family AT5G50630 43.993 2.74e-174 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151413g00003 - - gmx:100817909 653.284