Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151412g00008 ATGGTTATTATGGAGCATGTTAGTAGTAATGGTAGTAATAATTTATTGGGTCGTAGAAAGGCAATTGAGGAGCTTGAAAAGGGTCGTGAATTTGCAAACAAGCTTAGGCTTGTGATCAACGGCGGCAGCGACGACGGCGGCGACGGCGACAGTGAACAACTTGTGAAGAAGGTTCTTATGTCATTCACAAACTCGCTCTTGATCTTGAACAAGAATAATTCTGATGAGGTGAATGATGTGCCTTCTTCATGTGGGATGAATCCAACCAAGTCCGAGGATTCACTTGAGAGTAATTGCAAGAGCTCTGTTCATAAAGAACGAAGAGGGTGTTACAAGAGAAGAAGGACCTCACTAATAGTGGAGAAGGAGTCTACAGCTCCAATTGATGATGGTCATCAATGGAGAAAATATGGCCAAAAAGTGATCCTTAATGCCAAATATCCAAGGAACTATTACAGATGCACACACAAATTTGACCAAGGTTGTCAAGCAACAAAACAAGTACAACAAGTTGAAGATGAAGCATCACCACTTTACAAGACCACATACTATGGAATCCACACTTGTAGGAACACCCTGAACCCTCAAATCATATTGGATGATTCCAATGATGATTCTCATTCAAGATCTTCAATCTTCCTCAGCTTTGATAATTCCCTCCCAACAAAACAAGATTCTCCAATTTTTCTCTCATCATCACCACCATTAATCAAGAAGGAAGAGGAGGAAATTATTAATATTAATAATAACAATATTAATAATAATGTTCCTTCATTTTCTTCAAATGATTACATGATATCTTCAGAGCTCACTTTTGATAACTACTCAAAGCATCATCATGTTCATGCTCTATCATCATCAACACTTGACTCAGATGATGTTATTTCTGGTGGGTTCTATGATCCTCCTCAACTTGATGATGATGTCTTTGAGAATTTTTTTGATTATTAA 951 0.3785 MVIMEHVSSNGSNNLLGRRKAIEELEKGREFANKLRLVINGGSDDGGDGDSEQLVKKVLMSFTNSLLILNKNNSDEVNDVPSSCGMNPTKSEDSLESNCKSSVHKERRGCYKRRRTSLIVEKESTAPIDDGHQWRKYGQKVILNAKYPRNYYRCTHKFDQGCQATKQVQQVEDEASPLYKTTYYGIHTCRNTLNPQIILDDSNDDSHSRSSIFLSFDNSLPTKQDSPIFLSSSPPLIKKEEEEIININNNNINNNVPSFSSNDYMISSELTFDNYSKHHHVHALSSSTLDSDDVISGGFYDPPQLDDDVFENFFDY 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151412g00008 316 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 25 206 IPR044810 GO:0003700
Stsc151412g00008 316 ProSiteProfiles WRKY domain profile. 123 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151412g00008 316 MobiDBLite consensus disorder prediction 77 96 - -
Stsc151412g00008 316 Pfam WRKY DNA -binding domain 129 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151412g00008 316 SUPERFAMILY WRKY DNA-binding domain 125 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc151412g00008 316 SMART WRKY_cls 128 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151412g00008 316 Gene3D WRKY domain 113 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc151412g00008 316 MobiDBLite consensus disorder prediction 77 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151412g00008 Stsc-Chr151412 35055 37728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151412g00008 14 205 WRKY Transcription Factor Family AT3G56400 39.303 4.21e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc151412g00008 WRKY 3.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151412g00008 - - ahf:112797210 427.943