Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151410g00002 ATGGTGTACGAGTTCATAGAAAACGGAACACTCCTTGACCACTTGCAGGGTCAAAAGAAACTGGAACGCAGCCTTCTAACATGGAAGCATCGCCTTGGAATCGCGCGTGACACCGCTGAAGGCCTCGCATACCTTCATTTCATGGCTGTTCCTCCGATTTACCACAGAGACGTTAAGTCCAGCAACATTCTCCTCGATTCAAAGATGAATGCTAAGGTCTCTGATTTCGGTTTATCAAGGCTGGCACAAACTGATATGAGCCACATTTCAACCTGTGCTCAGGGTACTCTTGGCTACCTTGATCCGGAATACTATAGGAACTACCAATTGACGGATAAGAGTGATGTGTATAGCTTCGGTGTTGTGCTGCTTGAGCTTCTTACGGCGCACAAGGCCATAGATTTTAACAGGGATGCGGACGATGTGAACTTGGCGGTTTATGTCCAGAGGATGGTGGAGGAAGAGAGGCTGGTGGAGGTGATTGATCCTGTGTTGAAGAATGGGGCTAGTGCCATGGAGATTGACACCATGAAGGCGTTGGCGTTACTTGCTCTTGGGTGCTTGGAGGAGAGGAGGCAGAACCGCCCTTCCATGAAGGAGGTGGCGGAAGAGATTGATTATATCATTAGTATTGCCACTGCAAATGATGTGAAGAATTGA 660 0.4818 MVYEFIENGTLLDHLQGQKKLERSLLTWKHRLGIARDTAEGLAYLHFMAVPPIYHRDVKSSNILLDSKMNAKVSDFGLSRLAQTDMSHISTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTAHKAIDFNRDADDVNLAVYVQRMVEEERLVEVIDPVLKNGASAMEIDTMKALALLALGCLEERRQNRPSMKEVAEEIDYIISIATANDVKN 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151410g00002 219 FunFam Wall-associated receptor kinase-like 20 6 218 - -
Stsc151410g00002 219 Pfam Protein tyrosine and serine/threonine kinase 1 204 IPR001245 GO:0004672|GO:0006468
Stsc151410g00002 219 ProSitePatterns Serine/Threonine protein kinases active-site signature. 53 65 IPR008271 GO:0004672|GO:0006468
Stsc151410g00002 219 SUPERFAMILY Protein kinase-like (PK-like) 1 203 IPR011009 -
Stsc151410g00002 219 PIRSF ILK 1 218 - -
Stsc151410g00002 219 Gene3D Transferase(Phosphotransferase) domain 1 6 218 - -
Stsc151410g00002 219 SMART serkin_6 1 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151410g00002 219 ProSiteProfiles Protein kinase domain profile. 1 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151410g00002 219 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 208 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151410g00002 Stsc-Chr151410 14269 14928 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151410g00002 1 211 Receptor kinase-like Gene Family AT5G02070 65.278 1.78e-96 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Stsc151410g00002 PK_Tyr_Ser-Thr 1.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151410g00002 - - gmx:100305415 372.859