Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151406g00003 ATGCAACTGCTGCTTCTTCATTTCTTTCGACAAAGAAACCCTAACCTACCTTCAACCCCTCTCTCTCTCCCCAACCCCCATCACCTTGTCTGCCGTCTCCGCTGCCCCCATTGCAGCCGTAAGACGTCGTCGTCACCTCCATTGCAGCCTGAAGTTGTCATCCCCAATGACGCGAAGTTGGGAAGGAGGGGGAGCGAGCTCTGCGTTGTCTCACACTTCGTGTCTCCCTTCCCGTTGACGTCTCACTTCTCGAATAATTTTGAGCTGAAATTGAGAAGAATGCTTGAAAATTGTTCTTGTGTAGCTTATGCTAAAATAAATGTGAATGCAAGTGGCAAAGAATATGTTATCTGGTTTGGAGATTTGTTTGATATTAGAGAGGTTCCTGTCTATGGTCAAGATCTCTATGTCAGAGTTTCACAAAGTAGTGTGCTATTTGAGATGGGTTTAGAGCTTTCACTGACACGTCTTAAAGCTTTTGCAAACTATGCCTTTGGGATGGAATTGCCTCAGCTGGTACCTCCTCTGCTCCAAGAAACAACATGGTTGGTTGTTGGATCATCCTCCACATCAAAGGTTTTGGTCAAGAATGGTGGTGGCCCTATTTCGTGA 612 0.4592 MQLLLLHFFRQRNPNLPSTPLSLPNPHHLVCRLRCPHCSRKTSSSPPLQPEVVIPNDAKLGRRGSELCVVSHFVSPFPLTSHFSNNFELKLRRMLENCSCVAYAKINVNASGKEYVIWFGDLFDIREVPVYGQDLYVRVSQSSVLFEMGLELSLTRLKAFANYAFGMELPQLVPPLLQETTWLVVGSSSTSKVLVKNGGGPIS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151406g00003 203 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 92 178 - -
Stsc151406g00003 203 Pfam PAN-like domain 95 125 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151406g00003 Stsc-Chr151406 33653 36951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151406g00003 144 173 Inorganic Solute Cotransporters AT4G04850 70.000 1.71e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151406g00003 - - qsu:112035700 78.9517