Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151405g00010 ATGTGTTCTTCTGCAAAAGAATACGATGTTTTTCTGAGTTTCAGAGGTGCAGACACACGCAACAACTTCACCATCCATCTCTTCAACGCTCTCAAAAACAAATCAATAAAAACGTACATGGACTCTCTTGTTGACAGAGGAGAAGATGTTTGGCCATCACTTGAGAGGGCCATCGAGGACTCACACGTCTCAATCGTGGTGTTCTCCAAAGACTATGCTTCTTCCAAGTGGTGCTTGCAAGAACTGGTGAAGATTCTGCAGTGCAGAAAACTTCTTGGTCAGGTTGTGATACCTGTGTTCTACGGAACAGATCCGTCGATGATAAGGGGTCAGACTGGGAGTTTTGAACAATCATTTGCGAAACACGTACGAGGTCTGGGAGACAATGACATCAAAGTCAAGAAATGGAGAGATGCTCTCACTGAAGCAGCCCAAATTTCTGGCTGGGACTCCCGAAATCTGAATGAACCTCAACTCATAGAGAATATTGTCAACGATGTATTGCAAAAGCGATGCCTGAGGAGACCTATTGAGATAAATGACCATGTTGGAACCGACCAAATCTGTAAGAATGTAGAAATCTTAATGAAAAAATACAAAGTCATTGGGATTTGGGGCATGCCCGGAATTGGCAAGACAACCATTGCTAATGTCTTGTTTGCCAAACTCTTCCCCCAATTTGACAAGGTTTGCTACGTAGCCAATGTAAAAGAATACTCACATGATAGACTCATCTCTAAGCTTTTAAAAGAAGAAATCTCCATACCTAATGTTGTTGGATTCCATCAATACGGTCTAAAAAGGCTTGGTAGCAAGAAAGTTTTCATAGTACTTGATGATGTTGATAGTTTGGATCAAGTGAAATATTTCTGTAGAGAATACCGAGACCTAAGTGAAGATAGTAGACTCATCATCACAACAAGAGATAAGCATATTCTTAAAGATGAAGTTGATTGGATCCATGAGGTTAAGAAATGGAATGATCCACAATCACTTCAACTCTTTTGCTTAGAAGCCTTCAATGAGATTCATCCTCCGGAGGGTTACGAGGTTCTATCCGCCAGCGCGGTGAAGTATGCCGGCGGAGTCCCACTGGCTTTAAAGGTTTTGAGTTCGAGTCTCAGATCAAAACCTATTGACTTCTGGAAAGGTACTCTGGAGAAACTGAAGAAGTATCCTAATGAGACTATTCAGAACTTGTATAAGATGAGCTATGATGGGTTAGATGAAGAAGAGAAAAAGATATTTCTTGAGATTGCATTTTTTCACAATGGAGAAGAAAAGGATAGTGTGACAAGCATACTCATGGCGTGTGGGCTTGAAGCAAGGTGTGGAATGGTGGTCCTTCAAGATAAAGCTTTCATATCTATTTCATATAACAATACAATAGAAATCCATGACTTGTTGAGAAAAATGGCCTTTGAAATAGTGCGTCGAGAAAGTAGTGAAGACCCTACAAGACGTTGCAGATTGATGAGGGACACTGAAGAAATTTGTGCTATGCTCAAAGATAACAAGGGCACAGATGCAATTGAAGGCATAATGCTAGATTTGTCACAAATTGGAGAAATTCAGTTGAGTGCTCATGCTTTTAAAAGGATGAACAAATTAAGATTTCTTAAATTATATAAGCCCTCAGATCAATGTGCTGGTAACATTAGTCTTCCTGAAGGGCTTGAATCATTTTCTGACAAACTAGTGTACCTTGAGTGGTATGGATACCCTTTGGAATCTCTTCCACTTAACTTTTCTGCTAAGTTCCTTGTTGAGATTCGCATGTCTCACAGCAATGTCAAACAACTATGGCAGGGGATTCAGGAAGTTGGCAACCTAAAGAGAATTGATTTAAGTGAATGCAAGAACTTAATAAAGCTTCCAGATTTGTCCAAGGCTAAAAGACTGAGATGGGTGAATCTCTCTGGCTGTGAGAGTTTGTGTGCTCTTCATTCATCGGTTTTATCCTCGGACACACTTGTAACTTTGATACTAGACAGGTGCACACATTTGCAATATGTTAAAGGCGATAAGCACTTAAAATCTCTAGAGGATATCAGCGTCAATGGTTGCTCAAGTCTCGAGGAATTCGCAGTCTCCTCCGACTTGATTGAAAGCTTGGATCTAAGCAACACAAGAATTGAAACTCTACACACATCAATTGGCCGTCTATGCAAACTTGGAAGCCTCAATCTAGAAGGTTCGCCTGTTAAGCTTCTCCCAACGGAGTTATGCTTGACATCTCTTAAGGTTCTAAGGCTCTCCTATGGTGGACTAGTAATTGACAAGCAGCAACTCCATGTTTTGTTTGATGGATTACGTTCTCTACAGATATTGCATCTCAAGGAATGTAGCAATCTGTTTGAATTCCCTGAAAATATTTGTGTCTTGTCAAAATTGCAGGAGTTAATTCTTGATGGAAGCTCTGTGAAGAGCTTGCCTCCGAGCATTAAGCATCTTCAGAGGCTTGAAATTCTGTCCTTCAAGACTTGCAAGAAGCTCCGGAGTTTGCCGGAGCTTCCACCGCTAATCCACGAGTTCTGCGCGGACGACTGCGCCATGTTGAAGTCGGTATCAAACCTGAAGACTTTTTCTAGGAAGATGGTGGGAAAGACCAAACACATCTCATTCAAGAATAGCTTGAAATTGGAGGAAGATTCATTGCAGTCTGCAATGAAAAGCCTCCATTTAACAATGATTAAAGCTGTATCTAACAATGTGAAAGTTAGAAAACACCGCGGAGGATATAATTATAACAGTGTGGAGGTTTGTTTACCAGGAAGTAGAGTTCCAAGGGAGTTCACATACAAAAAATCAGAGTCTTCATCAATTATCATTACTGAGCTTCCTGACTCTGAGTTGTTAGGCTTCATTTACTGTGTTGTTCTTTCGCCGTCCAACGGAACGAAGAGGGAAGGCGCTAAGCTGCGGTGTCAATGCCAGTTGGTTGGAGGCCAGAAGGATACATGGCTGAACAGAGCTGTGAGTGAGTTGAACTCAGATCATGTTTTTGTGTGGTATGATCCACTCCATTGTGACAACATTCTGAGATTCCATCCACCAAAGGTTCGTTTTGAGTTTAGTGTAACAACTGATGAAGGTGAAGTTGATGGATCAATCCATATTAAAGAGTGTGGTGTGCTGCTTATAAGTTTTTCAGTTGTGGAAAGTGTTTTACAAGAATTGGAGTTGCATTTGCCTGTTGATTTGGTTGAGGAAGAAAATGTGCTGGCTACTGAGGAGAATCAAAGCATGGGAGGACAGCGACAATGCATAGTTCATCCTGAGATCGACATGTATCAGGAAAAACAGAATCAATTCATGGATCTTGACAGATCTAAAGGATTACTGAAAGAAAGAAAGAATGTGCTCTCACAACCTTCAAACATGAAGATGGCTACTAAATTGTCGAGTCGAGAGCTTCGGATCCACTTGAAGGATGTAGCAAAACAGGCAGAAGTTGAAGGCGATTTTGCAAGGGCTGCTCAGCTTGCAGCTTTAGCCAAGGGAACTTCTGATGTTCTATGCAAAGAGAAAGGCAAAAGAGTAGTGGAATACAATCATGTTCATTCGGATTCAATTTTGACTCTAACTTCTCCTTTTAATGCAGAGATTCATGAACAAATTATCTTTCCTTTGGAGGATCCACAAGGATCTGTAGAGTTATTAAAAAACTTGGAAGCACCGGCTTCTAGTCCAATAAAAGAGTTTTTGGATGATCATGTCCTAAGTTTATATGATCATTCCCTAATGAAAGAACTTGGAGGTCCTGCACTTCTCCGTTGGCTTCAAGGTCAAGCACTTCGGTCGGCGAGCTTTGCAAGATACGCCGAGCTGGAGTTTGAAGCTGCCTCGAGAAGCATCGCTGAGAAAGATGAAGAATTAAGACTTGCAAGAGAAGAGGCGGTCAGGAAGCAAGAGAGCTTGAAAAGAATGGAGGATAGAGTGGAGGATCTAAACTCTGAGGTGGCTTCTTGGAGAAGAAAATATGAAGAAGCTCAAAAGGAACTTGAAGATGAGAAGAATTGGAGAGCTCTTTCATCTCAGGAGTGGCATAGAAGGGAAAGTGAGCTGAAGACAGAGGTGGCAACCCAGTTGGTTGCTTCGTTTCAAAATTGTAAGTTGCAGGTTCAAACTCTGTATCCTGACATTGATTTAAGTGGGCTTGGAGCTTTCAAGGAGATTCGGAATGGAGAGATTGCATCCCCTTATGATTCTGAGGAGATTGAGAATGAAGAAGATGCAAAACCTTTGGAGAAACTCCAAGATAGTGATGGTCATGGGGATTCCTTTGCAAATATTTTTGAAGTTAATGTAAGTTTGGATTAG 4323 0.412 MCSSAKEYDVFLSFRGADTRNNFTIHLFNALKNKSIKTYMDSLVDRGEDVWPSLERAIEDSHVSIVVFSKDYASSKWCLQELVKILQCRKLLGQVVIPVFYGTDPSMIRGQTGSFEQSFAKHVRGLGDNDIKVKKWRDALTEAAQISGWDSRNLNEPQLIENIVNDVLQKRCLRRPIEINDHVGTDQICKNVEILMKKYKVIGIWGMPGIGKTTIANVLFAKLFPQFDKVCYVANVKEYSHDRLISKLLKEEISIPNVVGFHQYGLKRLGSKKVFIVLDDVDSLDQVKYFCREYRDLSEDSRLIITTRDKHILKDEVDWIHEVKKWNDPQSLQLFCLEAFNEIHPPEGYEVLSASAVKYAGGVPLALKVLSSSLRSKPIDFWKGTLEKLKKYPNETIQNLYKMSYDGLDEEEKKIFLEIAFFHNGEEKDSVTSILMACGLEARCGMVVLQDKAFISISYNNTIEIHDLLRKMAFEIVRRESSEDPTRRCRLMRDTEEICAMLKDNKGTDAIEGIMLDLSQIGEIQLSAHAFKRMNKLRFLKLYKPSDQCAGNISLPEGLESFSDKLVYLEWYGYPLESLPLNFSAKFLVEIRMSHSNVKQLWQGIQEVGNLKRIDLSECKNLIKLPDLSKAKRLRWVNLSGCESLCALHSSVLSSDTLVTLILDRCTHLQYVKGDKHLKSLEDISVNGCSSLEEFAVSSDLIESLDLSNTRIETLHTSIGRLCKLGSLNLEGSPVKLLPTELCLTSLKVLRLSYGGLVIDKQQLHVLFDGLRSLQILHLKECSNLFEFPENICVLSKLQELILDGSSVKSLPPSIKHLQRLEILSFKTCKKLRSLPELPPLIHEFCADDCAMLKSVSNLKTFSRKMVGKTKHISFKNSLKLEEDSLQSAMKSLHLTMIKAVSNNVKVRKHRGGYNYNSVEVCLPGSRVPREFTYKKSESSSIIITELPDSELLGFIYCVVLSPSNGTKREGAKLRCQCQLVGGQKDTWLNRAVSELNSDHVFVWYDPLHCDNILRFHPPKVRFEFSVTTDEGEVDGSIHIKECGVLLISFSVVESVLQELELHLPVDLVEEENVLATEENQSMGGQRQCIVHPEIDMYQEKQNQFMDLDRSKGLLKERKNVLSQPSNMKMATKLSSRELRIHLKDVAKQAEVEGDFARAAQLAALAKGTSDVLCKEKGKRVVEYNHVHSDSILTLTSPFNAEIHEQIIFPLEDPQGSVELLKNLEAPASSPIKEFLDDHVLSLYDHSLMKELGGPALLRWLQGQALRSASFARYAELEFEAASRSIAEKDEELRLAREEAVRKQESLKRMEDRVEDLNSEVASWRRKYEEAQKELEDEKNWRALSSQEWHRRESELKTEVATQLVASFQNCKLQVQTLYPDIDLSGLGAFKEIRNGEIASPYDSEEIENEEDAKPLEKLQDSDGHGDSFANIFEVNVSLD 1440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151405g00010 1440 Gene3D - 168 321 IPR027417 -
Stsc151405g00010 1440 ProSiteProfiles TIR domain profile. 6 171 IPR000157 GO:0007165
Stsc151405g00010 1440 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 149 IPR035897 -
Stsc151405g00010 1440 Pfam NB-ARC domain 197 405 IPR002182 GO:0043531
Stsc151405g00010 1440 PRINTS Disease resistance protein signature 606 622 - -
Stsc151405g00010 1440 PRINTS Disease resistance protein signature 360 374 - -
Stsc151405g00010 1440 PRINTS Disease resistance protein signature 201 216 - -
Stsc151405g00010 1440 PRINTS Disease resistance protein signature 268 282 - -
Stsc151405g00010 1440 Gene3D Ribonuclease Inhibitor 701 894 IPR032675 -
Stsc151405g00010 1440 Gene3D Ribonuclease Inhibitor 478 700 IPR032675 -
Stsc151405g00010 1440 MobiDBLite consensus disorder prediction 1399 1428 - -
Stsc151405g00010 1440 Gene3D - 4 167 IPR035897 -
Stsc151405g00010 1440 Pfam Leucine Rich Repeat 587 606 IPR011713 -
Stsc151405g00010 1440 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 698 IPR044974 GO:0006952
Stsc151405g00010 1440 SMART till_3 7 146 IPR000157 GO:0007165
Stsc151405g00010 1440 Gene3D - 326 409 IPR042197 -
Stsc151405g00010 1440 Pfam TIR domain 8 171 IPR000157 GO:0007165
Stsc151405g00010 1440 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 417 IPR027417 -
Stsc151405g00010 1440 SUPERFAMILY L domain-like 515 838 - -
Stsc151405g00010 1440 Coils Coil 1279 1341 - -
Stsc151405g00010 1440 FunFam Disease resistance protein (TIR-NBS-LRR class) 4 172 - -
Stsc151405g00010 1440 SUPERFAMILY "Winged helix" DNA-binding domain 396 481 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151405g00010 Stsc-Chr151405 33370 39152 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151405g00010 3 826 WRKY Transcription Factor Family AT4G12020 30.860 1.60e-89 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151405g00010 - - ahf:112708798 1943.32