Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151405g00009 ATGCGTACCCTAAAGCACCCGATTGTACCAACAGGTCTCGTTGGAATGGAAGAAATCTATGAAAGTATTGGAGTCGACGTGGAGCAACATCAAGTAATCGGAATTTGGGGTATGGTTGGAATAGGAAAGAGAACCATTGCGAAAATGTTGTTTGCAAAATACTTTCATAATTATGACCATGTTTGCTATGCGGAAAATGCAAAAGAATATACGCCTCAAAGGCTTATCTCGGAGCTATTAAGGAAGGAGATTCCCATTGATGTGACAGGATTCAAAACCAGTATGAGCAGTCTTTGCAAGAAGAGAGTTCTCATTGTTCTGGACGATGTGAGGAATTCAGATCAATCATTGATAGAAGCAGTGTGCGAAGTGTACAAGAGCTACTATAGTCGTGCGAGTAAACTTATTATAACAACCACATATAGGCATTTGCTTGAAGGGAGAGTTGATCACATATATCATGTCCAGCCCTTGGAAGAATCAAAAGCTATAGAGCTTCTTAGCCTCAAAGCATTCGGGAAAAGAGTCCCTCAAGACTCTTTTGAGAGTCTCGTAAAAAGGGTTGTTGATTATGCCGGGGGGAATCCATTAGCTCTCAACCTTTTGGGTTCAGATCTTCGAACCAAAAACCAAGATTTCTGGCTAAGTACTTTGGAAAAGCTTGAGAAGCATTCTAATCAAGTCATTTATAATGCCTTCAGAAAGATTTATGATGAATTGGAGGAGCTAGAAAAGGACATATTTCGTGACATTGCTTTCTTTTTCCATGGAGAAAAGAAAGATCTCGTCACAAGCATATTAAAAGCCTGTGATTTCTCACCAGTAAGAGGAATAGAGGTTCTTCAAGATAAAGCAGTCATTACTACTATCCCGTATAAAGAAACAATCGAAATGCATAGCTTGCTAAGGAAAATTGCTTTCGATATTGTACGCACGGAAAACGGAAAACACCCTAGAAAACATAGCCGATTGAGGGATATTGAAGACATTCGCGATGTACTCGTAGAAAACAAGGAGACTCTTGATACTGAAGGCATAATATTAGATTTGTCTCAGATTAAAGAAGAATTGCGTTTGAGTCCTGACGCATTCAAAAGGATGAAAAAGTTGAGATTTTTAAAATTCTATATCCCCGCGGCTCAGAGTTCTGGTAAGATTAACCTTCTTGAAGACCTTGAGCCATTTTCTGGTAAATTAAGGTACTTTGAGTGGCATCAGTACCCTTCCAAGTCTCTTCCACCAAGGTTTTGTGCTAAGTTACTTGTTGAGATTCGCATGCCACACAGCCAAGTCGAGAGACTTTGGTCGGAGAAGCAGGAACTTGAGCATTTAGAAGGGATCGACTTAAGTGAATGCAAAAAGTTACAAGAGCTTCCAGATTTATCTGAGGCTAAAGGACTCAGATGGGTGAATCTCTCTGGTTGTGAGAGTTTGACTACTCTCCATTCATCTCTTTTTTCCTCCAACACACTTGTTTCTTTGATACTGGATAGGTGCACAAATTTGCAGTGTGTTAAGGCCGAAAGGCATCTGAATTCTCTGCACTACATAAGTGTCAAAGGATGCTCAAATCTCACAGAATTTGCAGTGTCATCAGATTTAATCAAAAACTTGGATTTGAGTAACACAAAGGTTGAAAAGCTGGACAAATCAATCGGGAAATTACTGAAGCTTGAATGCCTCAATCTGGAAGGTTCAAGAGTTAAGCATCTTCCAAAGGAGCTATCAGCACTGAAATTGCTTGAGTTGAAGCATTCATATAGTGGACTAGTAATTGACAAGCAGCAGCTGCAAGACCTGTTTAACGGCTTACACTCTCTGCAAATACTACATTTGAAGGAGTGTAGGAAATCATTTGAATTCCCCAACAACATCGGTGCCTTATCGAAATTGCGTGAGTTAAGGCTGGATGGAAGCAATGTTACCAGGTTGCCTGCAACCATCAAGCTTCTTAAAGAGTTGGAAGTTTTGTCCCTAAATAATTGCAGCTCTCTTGAGACACTGCCAGAACTTCCGTCCTCTATCAAGGAGTTCTCTGCAGATAACTGCATCTCATTGGAGTCTGTATCAGATCTAAACCCTCTGGCAACAAAGATGGTTGGAAAGACAAAACGCATCTCATTCAATAATAGCTTGAAACTGTTGGCCGGACACACATTGCGTTCGATCATGGAAAGCATCCATTCAACAATGATGAGTGCTGTATCTAGCAATGTCAAGGTACGAAGCTATGCAACTCATGTCCATGGCTACAATTACAACAGTGTGGAGGTTTGTTTGCCCGGAGACAAAATCCCAGAGCAATTTGCATCTAAAACGGAGAAATCCTCCTCCATAGCAATTGAACTCCCTGACTCCCCTACCAACTTTCTTGGCTTTATCTATTCAGTGGTTCTTTCACCGCGTCATGGAATGAAGAATCACGGTGCCAAAATCCGATGCAAGTACAACTTTGCAGGAGGCATGAATTCTTCTTGGGAGGACATAACCGTAAGTGAATTGAACTCGGATCATGTATATATATGGTATGATCCCTTCCACACTGACAAAATTCTTGGACAAGATAAGCCTAGTTTTCATCTTGAGTTCAGTGTTGTTGCAACTGACATTGGGGAAGTTGATGACTCCATCATTATTAAAGAGTGTGGCGTTCAAATCATAAATGAATCAGAATGGCAGATATTTTCACTGGAATTAAATAAGAAAAAGGATATGGAGGAGGAATCATCAACGCAACGGTTAAATCCACCACATGGATCTCAAGATCACAGCCATATGCAGACTCCACACCAAGACATGAAGAAAGTAAGATTTGATGAGAAGCAGAGCAATGACATTGAAAACCAGACATCAAAGCAACAAAGAGAAATGAATGGACAATCATCTTCAGGTAGGAAAGTCGAAGAGAAGATGGAATCAGCTACCAATGAAAACAAGACTAGTGATGGAAACATTCATAAGGAGAACAACATAATTATTAACTCCTTGGATAAACGCTTCCAAGAGTTAGGGGACAATCATGCTGTATATCCATACGATCATTCCGTGAGAAATGAGCTTGATGTTTTGGCACTTTGTCGTTGGCTTCAAGTTCAAGGGCTTTGTTCAGTGAGCGCTGTGAGATACACCGAGATGAAGTTCGAAGCTGCCAAACAGGAAATGAAGGAAGAATTAAGACTTGCAAGAGAAGAAAATGCAAAGGCTTTGAAAACAATGGAGGAGAGGGTTTCACATCATGTTGAATCGTTGGAGAAAAGAGTCGAGGATTTGAGTTCTGAGGTGGCTTGTTGGAGAAGTAAATATGAAGAAACTCAAAAGAAACTTGGACATGAGAATCGAGAATGGCAAGAAGAGAGTGATGAGGTGAATAAGGAGACGGCAACTGAAAATTGCAGGTCACAGATTTCGAGTTTGTCCCCCTCTGATTTGAAGGAGACTGAAAGTAAAAAAGACACCAGCAACTTTCAACATGCTGCTCCTGGCGGAGGCGCTTTGTCCAGTAAATTGCTAATTTCTTTCTGCTGTCTTTTCATTTTTTGGCGTCTTAAAACTCACTAA 3558 0.4056 MRTLKHPIVPTGLVGMEEIYESIGVDVEQHQVIGIWGMVGIGKRTIAKMLFAKYFHNYDHVCYAENAKEYTPQRLISELLRKEIPIDVTGFKTSMSSLCKKRVLIVLDDVRNSDQSLIEAVCEVYKSYYSRASKLIITTTYRHLLEGRVDHIYHVQPLEESKAIELLSLKAFGKRVPQDSFESLVKRVVDYAGGNPLALNLLGSDLRTKNQDFWLSTLEKLEKHSNQVIYNAFRKIYDELEELEKDIFRDIAFFFHGEKKDLVTSILKACDFSPVRGIEVLQDKAVITTIPYKETIEMHSLLRKIAFDIVRTENGKHPRKHSRLRDIEDIRDVLVENKETLDTEGIILDLSQIKEELRLSPDAFKRMKKLRFLKFYIPAAQSSGKINLLEDLEPFSGKLRYFEWHQYPSKSLPPRFCAKLLVEIRMPHSQVERLWSEKQELEHLEGIDLSECKKLQELPDLSEAKGLRWVNLSGCESLTTLHSSLFSSNTLVSLILDRCTNLQCVKAERHLNSLHYISVKGCSNLTEFAVSSDLIKNLDLSNTKVEKLDKSIGKLLKLECLNLEGSRVKHLPKELSALKLLELKHSYSGLVIDKQQLQDLFNGLHSLQILHLKECRKSFEFPNNIGALSKLRELRLDGSNVTRLPATIKLLKELEVLSLNNCSSLETLPELPSSIKEFSADNCISLESVSDLNPLATKMVGKTKRISFNNSLKLLAGHTLRSIMESIHSTMMSAVSSNVKVRSYATHVHGYNYNSVEVCLPGDKIPEQFASKTEKSSSIAIELPDSPTNFLGFIYSVVLSPRHGMKNHGAKIRCKYNFAGGMNSSWEDITVSELNSDHVYIWYDPFHTDKILGQDKPSFHLEFSVVATDIGEVDDSIIIKECGVQIINESEWQIFSLELNKKKDMEEESSTQRLNPPHGSQDHSHMQTPHQDMKKVRFDEKQSNDIENQTSKQQREMNGQSSSGRKVEEKMESATNENKTSDGNIHKENNIIINSLDKRFQELGDNHAVYPYDHSVRNELDVLALCRWLQVQGLCSVSAVRYTEMKFEAAKQEMKEELRLAREENAKALKTMEERVSHHVESLEKRVEDLSSEVACWRSKYEETQKKLGHENREWQEESDEVNKETATENCRSQISSLSPSDLKETESKKDTSNFQHAAPGGGALSSKLLISFCCLFIFWRLKTH 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151405g00009 1185 Gene3D - 157 241 IPR042197 -
Stsc151405g00009 1185 MobiDBLite consensus disorder prediction 1108 1157 - -
Stsc151405g00009 1185 SUPERFAMILY L domain-like 357 689 - -
Stsc151405g00009 1185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 251 IPR027417 -
Stsc151405g00009 1185 Gene3D Ribonuclease Inhibitor 533 741 IPR032675 -
Stsc151405g00009 1185 Gene3D Ribonuclease Inhibitor 344 532 IPR032675 -
Stsc151405g00009 1185 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 531 IPR044974 GO:0006952
Stsc151405g00009 1185 MobiDBLite consensus disorder prediction 1108 1127 - -
Stsc151405g00009 1185 MobiDBLite consensus disorder prediction 962 984 - -
Stsc151405g00009 1185 MobiDBLite consensus disorder prediction 925 946 - -
Stsc151405g00009 1185 MobiDBLite consensus disorder prediction 1128 1142 - -
Stsc151405g00009 1185 Pfam C-JID domain 760 891 IPR045344 -
Stsc151405g00009 1185 Pfam NB-ARC domain 29 240 IPR002182 GO:0043531
Stsc151405g00009 1185 Pfam Leucine Rich Repeat 421 439 IPR011713 -
Stsc151405g00009 1185 MobiDBLite consensus disorder prediction 903 986 - -
Stsc151405g00009 1185 Coils Coil 1044 1125 - -
Stsc151405g00009 1185 MobiDBLite consensus disorder prediction 947 961 - -
Stsc151405g00009 1185 Gene3D - 14 152 IPR027417 -
Stsc151405g00009 1185 PRINTS Disease resistance protein signature 192 206 - -
Stsc151405g00009 1185 PRINTS Disease resistance protein signature 32 47 - -
Stsc151405g00009 1185 PRINTS Disease resistance protein signature 649 665 - -
Stsc151405g00009 1185 PRINTS Disease resistance protein signature 97 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151405g00009 Stsc-Chr151405 28625 32707 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151405g00009 13 657 WRKY Transcription Factor Family AT4G12020 31.009 5.48e-70 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151405g00009 - - aip:110266592 1458.35