Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151405g00004 ATGGAAAACTGCAAGGCAAAATTCATATGCAGCTACGGCGGCAAGATCCAACGCGACACACACGACCACACTAAGCTTTCCTACGTGGGCGGCCACACCAAGATCCTCTACATCCAGCGCACCATGATAACCTTCCCCACCATGCTCGCCAAGCTCGCCGCCCTATTCAATGCCGCGGACGGCGACGTCTCCTTCAAGTACCAGCTTCCCGGCGAGGATTTCGATTCCCTTATCTCCGTCACGGACGATAACGACCTCGAAAACATGATGATCGAGTACGATCAACTCCGCCACACTTCGGCTACACCCGCCCGCTTACGACTCTTCCTCTTCCCCAACAACAATCCTCCTTACCAATCTCTCGATTCGGATTCTGCCCGACCCGATATGGTTATTTCAAAGCCTAATGGCGATGCTGGTGTTGTTGTTGGCACTTCTTCCTCTTTCTGTAGCACACTAGCACTTCCAAGCAAACCTGACAATGACATAATTGGTTCCGTTGACCTTGACCAGTACATGGATCAGTGTCTTCTTGAAGAACAGTTTTTCCCGAGCATAGCTGGATCAGCACCGTATTGTTCACGTCCGCACACACCATTTACAACACGGTACACATAA 618 0.5097 MENCKAKFICSYGGKIQRDTHDHTKLSYVGGHTKILYIQRTMITFPTMLAKLAALFNAADGDVSFKYQLPGEDFDSLISVTDDNDLENMMIEYDQLRHTSATPARLRLFLFPNNNPPYQSLDSDSARPDMVISKPNGDAGVVVGTSSSFCSTLALPSKPDNDIIGSVDLDQYMDQCLLEEQFFPSIAGSAPYCSRPHTPFTTRYT 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151405g00004 205 PANTHER OS05G0427100 PROTEIN-RELATED 5 138 - -
Stsc151405g00004 205 SUPERFAMILY CAD & PB1 domains 24 121 - -
Stsc151405g00004 205 Gene3D - 23 112 - -
Stsc151405g00004 205 SMART PB1_new 21 113 IPR000270 GO:0005515
Stsc151405g00004 205 Pfam PB1 domain 25 112 IPR000270 GO:0005515
Stsc151405g00004 205 CDD PB1_UP2 9 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151405g00004 Stsc-Chr151405 13889 15108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151405g00004 5 141 MAP Kinase Kinase Kinase AT2G35050 38.686 2.18e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151405g00004 - - ahf:112710162 182.57