Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151404g00005 ATGGAAGATAAACCCAGCGAAGTTGTGCTGTTTGGGACATGGTATAGCTCATACACATCAAGGGTAGCACTTGCCCTTAAACTTAAGGGCATACCCTTCAAATACGTAGAAGAAAATTTGTCAAACAAAAGCGAGTTGCTCCTCAAGTTCAATCCTATCCACAAAAAGGTTCCAGTACTCTTGCACAATGGCATGCCAATTTGTGAGTCACTCATCATTCTAGAATATATTGATGAGGTTTGGAACCATGCTCCCAAACTCTTGCCAGAGGATCCTTATCAGAGGGCTAGGGTTCGTTTCTGGACCAACTACACTGATCAAAAGATCATGCCTGCCTGCTATCCCATCCTCTTAAAGAGAGGAGAGGAGAATCAAAAAGCAATTGAAGACATGGAAGAGATGCAGAGAGTGCTTGAAGAAGGTATCAAGCAAGATTTTCCTGAGAAATCCAGTTTCTTCAACGGCAAAACAATGGGACTCCTTGACATTGTGATGGGTGTGAATGGTTACAACTATAAAGCATTCCATGAGGTCACTAATTCAGAAATTATTGGACCCAAAAACCCAAAAATTTTCATGTGGGTTAATGCTCTTAAGGAACATCCTCTTATGAAGGATACACTTCCACCACATGACAAGGTTGTTGCTATGCTTAAAAGCAAGATTGCTCCCACACCTGATGTCTGA 687 0.4163 MEDKPSEVVLFGTWYSSYTSRVALALKLKGIPFKYVEENLSNKSELLLKFNPIHKKVPVLLHNGMPICESLIILEYIDEVWNHAPKLLPEDPYQRARVRFWTNYTDQKIMPACYPILLKRGEENQKAIEDMEEMQRVLEEGIKQDFPEKSSFFNGKTMGLLDIVMGVNGYNYKAFHEVTNSEIIGPKNPKIFMWVNALKEHPLMKDTLPPHDKVVAMLKSKIAPTPDV 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151404g00005 228 Gene3D - 88 226 - -
Stsc151404g00005 228 CDD GST_N_Tau 8 81 - -
Stsc151404g00005 228 SUPERFAMILY Thioredoxin-like 8 110 IPR036249 -
Stsc151404g00005 228 FunFam Tau class glutathione S-transferase 1 89 - -
Stsc151404g00005 228 SFLD Main.3: Omega- and Tau-like 6 221 IPR045073 -
Stsc151404g00005 228 Coils Coil 124 144 - -
Stsc151404g00005 228 FunFam Glutathione S-transferase U9 88 226 - -
Stsc151404g00005 228 SUPERFAMILY GST C-terminal domain-like 79 221 IPR036282 -
Stsc151404g00005 228 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
Stsc151404g00005 228 Gene3D Glutaredoxin 5 87 - -
Stsc151404g00005 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Stsc151404g00005 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 215 IPR045073 -
Stsc151404g00005 228 CDD GST_C_Tau 92 219 IPR045074 GO:0004364|GO:0006749
Stsc151404g00005 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 225 IPR010987 -
Stsc151404g00005 228 SFLD Main (cytGST) 6 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151404g00005 Stsc-Chr151404 17416 18568 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151404g00005 1 219 Glutathione S-transferase Gene Family AT1G74590 44.545 1.30e-70 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151404g00005 K00799 - qsa:O6P43_025459 305.834