Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151402g00007 ATGTCAACTAAGGGTAACATAGGCGCCTGGGCCGCCGATGTTGAGAGGGAGGAGCAGGAGGCTGCTGCCGCTGCACCAACTACCGGCGCTTCTGGAGTCGCCGGATCGGAGAACTTCCCGAGCCTCAAGGAAGCTGTGAGCGCCAAGCCCAAGATGAAGAAGATGACGCTCATGGAGTTCACCACTGGGAACTACGCCGGCGGTGGTGGCGGTGGATTCGCGAGGGAGCAGAGGGGCTTAACGCCGGACGAGATGCTCCGCCTTCCGACGGGGCCTAAGGAACGCTCCGCCGAGGAAATGCAGTACGGCCGCGGGTTCTCTAACTACGGCGGTGGCCGCTCCGGTCCGCCGCCTGGCCGAGGTCCTGACCGCGACGATGGCAACGGTTCCTGGGGCGGAGGAAGGAGATCCTATGGCGAGTTCGATAAAGAGCGCAGGGGTGGTCCCCGTTCTAGGGTTTCGGATTTTGATCAGCCTTCGAGGGCGGACGAGGTGGACAATTGGGCTTCGGTGAAGAAACCGGTTCCGGCATTCGATTCCGGTAGGCAAAATCGGTACGGTTCTGTTGGCGGTGGCAATGTTGACGGCGGTGTTGGTGGTTCTAGAGCGGATGAAGCGGATAATTGGATGGCTGGCAAGAAGCCTCTTCCTTCCAGATCTTCCACATTTGGTTCGGGGTTCCGCGATTCAGTTCCCGAGCCTGATCGCTGGACACGTGGCAAGCGTGACATGCTTGATTCGCGTGACAGCGATCGGGAGCGGCCGAGATTGGTGCTGGACCGGCCGCAAGGCAATGGTTCCGTGGACGTAACGGAGGCAGTGGCGGTGAAGACGAACAAGCCGAACCCTTTTGGCGCAGCGAGGCCAAGGGAGGAGGTTTTGGCTGAAAAAGGATTGGATTGGAAGAAGCTCGATTCGGAGATGCCCACGAGTGCACACTCCAGTAGGCCCTCCAGTGCCCAGTCGAGTCGCTCCGAGGTGCCTGCTTCGGAGGATGCGGTGAAGCCGAAGGCGAAGGTGAATCCCTTTGGGGATGCCAAGCCTAGGGAGGTTTTGCTGGAGGAGAAGGGAATGGATTGGAAAAAGATTGATCTTGAATTGGAGCATCGCCGTGTTGATAGGCCAGAAACAACAGAGGAAAAATTGTTGAAAGAAGAAATTGATAACTTGAAGAAGGAACTTGGGAAAGAGTCTGGAGGAGATTCAAATAAGATTTCTAGTGATGAAGTAGGCCCAACCAATACAGAATCAGTGTTACTTCAGAAAGAAAGGGAGCTGGAAATTCTTACCCGCGATTTGGATAACAAAATTCGTTTTGGGCAAAAAGCCACTGAAGGTCCAGGCTCTTCAACAGGAAGGGCTGCTGGTTTTCCCGATAGACCACAGCCTTCTCAATCTGGCTCGTTTGAGGATTCTAGAAGTGTTGATTTTGTAGACAGACCCCGAACCCGTGGCACAGGAAATATGTGGGTACGATCTAATGAGGACAGAAGACCATTACGTTCTAACGAGGACAGAAGACCATTTCAAGGTAGCAGGGACAGAGGATGGTTCCAGAATAGCAGAGACTTAGATAGGTCCAGGTCAAAAGAGAGGTGGTGA 1602 0.5481 MSTKGNIGAWAADVEREEQEAAAAAPTTGASGVAGSENFPSLKEAVSAKPKMKKMTLMEFTTGNYAGGGGGGFAREQRGLTPDEMLRLPTGPKERSAEEMQYGRGFSNYGGGRSGPPPGRGPDRDDGNGSWGGGRRSYGEFDKERRGGPRSRVSDFDQPSRADEVDNWASVKKPVPAFDSGRQNRYGSVGGGNVDGGVGGSRADEADNWMAGKKPLPSRSSTFGSGFRDSVPEPDRWTRGKRDMLDSRDSDRERPRLVLDRPQGNGSVDVTEAVAVKTNKPNPFGAARPREEVLAEKGLDWKKLDSEMPTSAHSSRPSSAQSSRSEVPASEDAVKPKAKVNPFGDAKPREVLLEEKGMDWKKIDLELEHRRVDRPETTEEKLLKEEIDNLKKELGKESGGDSNKISSDEVGPTNTESVLLQKERELEILTRDLDNKIRFGQKATEGPGSSTGRAAGFPDRPQPSQSGSFEDSRSVDFVDRPRTRGTGNMWVRSNEDRRPLRSNEDRRPFQGSRDRGWFQNSRDLDRSRSKERW 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151402g00007 533 MobiDBLite consensus disorder prediction 64 349 - -
Stsc151402g00007 533 MobiDBLite consensus disorder prediction 392 419 - -
Stsc151402g00007 533 MobiDBLite consensus disorder prediction 310 328 - -
Stsc151402g00007 533 MobiDBLite consensus disorder prediction 290 309 - -
Stsc151402g00007 533 MobiDBLite consensus disorder prediction 404 419 - -
Stsc151402g00007 533 Pfam Plant specific eukaryotic initiation factor 4B 4 516 IPR010433 GO:0003743
Stsc151402g00007 533 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 530 IPR010433 GO:0003743
Stsc151402g00007 533 MobiDBLite consensus disorder prediction 1 39 - -
Stsc151402g00007 533 MobiDBLite consensus disorder prediction 494 533 - -
Stsc151402g00007 533 MobiDBLite consensus disorder prediction 431 533 - -
Stsc151402g00007 533 MobiDBLite consensus disorder prediction 137 168 - -
Stsc151402g00007 533 MobiDBLite consensus disorder prediction 232 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151402g00007 Stsc-Chr151402 30936 34764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151402g00007 38 533 Eukaryotic Initiation Factors Gene Family AT3G26400 51.124 6.13e-136 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151402g00007 - - pcin:129309104 583.178