Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151401g00005 ATGAGTAGCAATGGCCAAACTTCTGGTGCTAGTAACAACGCCAGGGCTTTAATCTCCAACGCTGCTGCTGGTGCTGCCGCTGGGGCCATAGCAGCTACGTTTGTGTGTCCGTTGGATGTGATCAAGACAAGGTTACAAGTTCATGGTCTTCCTCCTGCACATAAAGGTAGTGTAATCATCACAAGCTTACAGAATATAGTAAGAAATGAAGGTGTTAGGGGAATGTATCGTGGGCTTTCACCAACAATTCTGGCTTTACTACCAAACTGGGCAGTTTACTTCACAGTTTATGAGCAACTAAAGGGACTGCTTCGTTCACAGGATGGTAGCAATGAACTCACAACTATTAGAAACGTCGTAGCTGCTGCTGGTGCTGGGGGAGCAACAGCAATTTCGACAAACCCATTGTGGGTTGTTAAGACAAGACTCCAACTGATTGGTTAA 444 0.4572 MSSNGQTSGASNNARALISNAAAGAAAGAIAATFVCPLDVIKTRLQVHGLPPAHKGSVIITSLQNIVRNEGVRGMYRGLSPTILALLPNWAVYFTVYEQLKGLLRSQDGSNELTTIRNVVAAAGAGGATAISTNPLWVVKTRLQLIG 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151401g00005 147 Gene3D Mitochondrial carrier domain 2 147 IPR023395 -
Stsc151401g00005 147 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 2 109 - -
Stsc151401g00005 147 SUPERFAMILY Mitochondrial carrier 18 145 IPR023395 -
Stsc151401g00005 147 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 18 144 IPR044712 GO:0006862|GO:0055085
Stsc151401g00005 147 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
Stsc151401g00005 147 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Stsc151401g00005 147 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Stsc151401g00005 147 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Stsc151401g00005 147 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Stsc151401g00005 147 Pfam Mitochondrial carrier protein 17 105 IPR018108 -
Stsc151401g00005 147 Pfam Mitochondrial carrier protein 112 145 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151401g00005 Stsc-Chr151401 42038 45156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151401g00005 1 147 Chloroplast and Mitochondria Gene Families AT1G25380 63.576 1.51e-45 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151401g00005 K15115 - gmx:100816376 214.542