Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151388g00007 ATGAGTAGTCCTAATAGTCGGAGTAGAAAACGCTCATTCCTTGACTTGAATGAAGAAGCTGGTGGTGAGGATGAAAACAATAATGAGATATGTTCATCATCATGGCAAGAAGGAGGGAATTTGAGTAGCAACAACTCATCAAGCGAAGAAGAAGGAGGAGGAGAAGGGAATCATAATAACAATAAAGGAAGAACAACAAGTAGTGCGGTAAGGCAATATGTTCGGTCAAAGATGCCAAGGCTTCGTTGGACTCCTGATCTTCATCTTGCTTTTGTTCAAGCTGTTAATCGCCTTGGTGGACAAGAAAGAGCAACACCAAAGCTGGTTCTTCAGTTGATGAATGTCAGAGGACTTAGCATTGCACATGTCAAGAGTCATTTGCAGATGTATCGAAGTAAGAAGCTTGATGAGTCTGGCCAAGTTTTATCCCAAAGTCGGGCAATGCAAGAAGGAAGGCATCAAATTTTGGAGATGTACCAAAGACTAAATGCACAAGGACAACACTTTGGGGTTGATCACATTATTAACAGGAGTAGTACTACTTATGTACCTCCATCTCTCCTCATCAAACAACAACCATATCATCACCATGCCTCTTCAAGATTTCACCCCCCAAGTGGTGGGATTTTCAATAGTCAAATGATGACAAGATCAAGTTCATTGGAGGACAAAGATTCATCATCAAGGTTATATGAAGCAAGCTCACATCTATTTGATGTAAGAGATGCAATAATAACAAGAAATAATAATAATAATGATAGTAATGGAGGTTTTAGGTCTTGCCAAATACTTGAACAAATGAAGTGGGCCCCTCCTCTTAGGGGAGCGTTATTAAAGGAAAGTGAGAAACATGAAACTTTTGGCATTTCAATGGATGGTAGTAATGGATTTACCTTCTCTGGTTCTATCAATAATAATAATCAATGTCATCATCATCAACCAAGTTCTTGCAGTAGCAGTGTTGTCTTCCCTGCTGGCCATGCCAAGTTAGATGCTCAGGTACATGATCTAAAAAAAGAAATGCATGATGAGAAGAAAGGGTCATTATCGAATTTCCTAGAGCTTAAGCTAAGCCAAGAGTCATTAGAAATCCCACAAAGTGAACAAGAAATCAATACTAAACTTTCTCTTTCACTATTCTCTTCATCATCAAATTCAAGTGATTACAGACACAAAGAGAAGAAAACCCAGGTTGAGCGTTTATGTTTACAACAAAATTTCACACAAAGGAGTCTGTTGGGCTGA 1245 0.3888 MSSPNSRSRKRSFLDLNEEAGGEDENNNEICSSSWQEGGNLSSNNSSSEEEGGGEGNHNNNKGRTTSSAVRQYVRSKMPRLRWTPDLHLAFVQAVNRLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQSRAMQEGRHQILEMYQRLNAQGQHFGVDHIINRSSTTYVPPSLLIKQQPYHHHASSRFHPPSGGIFNSQMMTRSSSLEDKDSSSRLYEASSHLFDVRDAIITRNNNNNDSNGGFRSCQILEQMKWAPPLRGALLKESEKHETFGISMDGSNGFTFSGSINNNNQCHHHQPSSCSSSVVFPAGHAKLDAQVHDLKKEMHDEKKGSLSNFLELKLSQESLEIPQSEQEINTKLSLSLFSSSSNSSDYRHKEKKTQVERLCLQQNFTQRSLLG 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151388g00007 414 FunFam Myb family transcription factor 77 135 - -
Stsc151388g00007 414 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 55 177 IPR046955 GO:0003700
Stsc151388g00007 414 Pfam Myb-like DNA-binding domain 81 131 IPR001005 -
Stsc151388g00007 414 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 135 IPR017930 -
Stsc151388g00007 414 NCBIfam myb-like DNA-binding domain, SHAQKYF class 79 134 IPR006447 GO:0003677
Stsc151388g00007 414 MobiDBLite consensus disorder prediction 26 67 - -
Stsc151388g00007 414 MobiDBLite consensus disorder prediction 1 67 - -
Stsc151388g00007 414 Gene3D - 78 135 - -
Stsc151388g00007 414 SUPERFAMILY Homeodomain-like 77 133 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151388g00007 Stsc-Chr151388 34006 36479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151388g00007 70 140 G2-like Transcription Factor Family AT2G42660 78.873 3.01e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Stsc151388g00007 Myb_DNA-binding 2.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151388g00007 - - aip:107612165 517.309