Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151388g00001 ATGCCTCATCATCACTTGCTTGTTATTCTTATTTCTCTTGTTGCTGCTTGTTCTATAGTGAGCAATGCACAACTCTCAGCAAATTTCTATGACAAAACTTGTCCTAATCTTCAAAGCATTGTGCTGAGTACAATGAAGCAAGCTGTCATCAATGAACCGAGAATGGGGGCCTCCATTCTTCGCTTGTTCTTCCATGATTGCTTCGTTAATGGGTGTGATGGATCAATCTTATTGGATGACACAGCCACATTCACAGGAGAGAAGAGTGCAGGACCAAACCAAAATTCAGCACGTGGTTTCAACGTGATAGACACCATTAAAACCAATGTTGAAGCTGCTTGCAATGCTACTGTATCTTGTGCTGACATTCTTGCACTTGCTGCTAGAGCTGGAGTAGTTCTGCTAGGAGGACCTTCATGGACAGTGGCTCTGGGAAGAAGGGATGCAACAACAGCAAGCAAAGCTGCAGCCAACAGCCAAATCCCTTCACCATTCTCCGACCTTTCCACCCTCACTTCCATGTTCTCCGCCAAAGGCCTTACCGCACGCGATCTCACCGCCCTCTCCGGGGCCCACACCATCGGCCAAGCTCAGTGCCAGTTCTTCAGAAACCGCATATACAACGAGACCAACATCGATTCCACTTTCGCCACGTCACGGAAAGGTAACTGCCCTTCCACCGGAGGGAACACGAACCTGGCCCCTCTTGAAACCCTAACTCCTGCTCGATTCGACAACAATTACTATAGAGATCTCGTTGCCAAGCGCGGGCTTCTTCATTCAGATCAAGTTCTTTCCAATGGTGGGAGTCAAGATGGTTTGGTTAGGTCTTATAGTGCGAATGGCGTTGGTTTCTTCAGTGATTTTGCTGCTGCCATGGTTAAGATGGGAAATATTAGTCCTCTCACTGGGAGTAGTGGGGAGATTAGAAAGAATTGTAGGGTGGTGAATTAA 954 0.4727 MPHHHLLVILISLVAACSIVSNAQLSANFYDKTCPNLQSIVLSTMKQAVINEPRMGASILRLFFHDCFVNGCDGSILLDDTATFTGEKSAGPNQNSARGFNVIDTIKTNVEAACNATVSCADILALAARAGVVLLGGPSWTVALGRRDATTASKAAANSQIPSPFSDLSTLTSMFSAKGLTARDLTALSGAHTIGQAQCQFFRNRIYNETNIDSTFATSRKGNCPSTGGNTNLAPLETLTPARFDNNYYRDLVAKRGLLHSDQVLSNGGSQDGLVRSYSANGVGFFSDFAAAMVKMGNISPLTGSSGEIRKNCRVVN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151388g00001 317 Gene3D Peroxidase, domain 2 162 296 - -
Stsc151388g00001 317 FunFam Peroxidase 28 171 - -
Stsc151388g00001 317 CDD secretory_peroxidase 24 316 IPR033905 GO:0004601|GO:0042744
Stsc151388g00001 317 PRINTS Plant peroxidase signature 291 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151388g00001 317 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151388g00001 317 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151388g00001 317 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151388g00001 317 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151388g00001 317 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151388g00001 317 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151388g00001 317 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151388g00001 317 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151388g00001 317 Gene3D - 28 314 - -
Stsc151388g00001 317 SUPERFAMILY Heme-dependent peroxidases 24 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc151388g00001 317 Pfam Peroxidase 43 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151388g00001 317 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151388g00001 317 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151388g00001 317 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151388g00001 317 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151388g00001 317 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151388g00001 317 ProSiteProfiles Plant heme peroxidase family profile. 24 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151388g00001 317 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Stsc151388g00001 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Stsc151388g00001 317 PANTHER PEROXIDASE 72-RELATED 20 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151388g00001 317 FunFam Peroxidase 162 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151388g00001 Stsc-Chr151388 1646 4624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151388g00001 20 313 Peroxidase AT5G05340 67.905 1.01e-143 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151388g00001 K00430 - gmx:100810392 498.819