Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151382g00002 ATGGTGCTAGGCGAGGGAGGTTTTGGCAACGTCTACAAGGGCTGGCTCGAAGACAATCCATCCTCCAACAATGCAAGTGGAACTGTCATTGCCGTCAAAAGATTGAACTCCGAAAGCTTACAGGAGTTTGCAGAGTGGCAGGCAGAAGTAAGTATTCTGGGATGCCTTTCTCATCCTAACCTTGTTAAGTTGTTGGGATACTGCCGGAAGGAAGCAGAAATTCTTCTAGTCTATGAATTTATGCAGAAGGGAAGCTTGGAACATCAACTATTTAGAAGGGGCTTTGCTGTTCAACCACTTCCTTGGGACGTTAGGCTTAAGATTGCAATCGGAGCAGCTCGTGGTCTGGCCTTCTTGCACACATCCGAGAAAGTAATCTACAGAGACTTCAAGGCCTCCAATATATTGCTCGATGGAGCCTACAATGCAAAGATATCAGACTTTGGCTTGGTCTTTGGCTTGGGGAAACTGGGTCCTTCGCCTAGTCGATCCCATGTGACAACTATGGTGATGGGCACATATGGTTATGCAGATCCTGAATATGTCGCTACAGGGCATCTGTATGTGAAGAGTGACGTGTATGCATTTGGAGTTGTTTTGGTGGAAATGCTAACAGGGCTGCGAGCATTTGACAGAAGGCGCTCAATTGAGCAACATAATCTAACAGATTGGATCAAACCATACCTGCATGACAGAAGAAAGCTGAAAAGCATTATGGATTCTCGGTTGGAAGGAAAATATCCGTCCAAAGCTGCATTTCGTATCGCTCAGCTTTCGTTGAGATGTCTTGAAACTAAGCCCAAACAGAGGCCGTCAATGAAAGAAGTTTTGGAGAGCTTGGAGCGACTTCATGCTGCCAATGAGAAACCTATGGAGCCCATATTTGGTTCCAATCATAATCATACCCGTTGA 912 0.4561 MVLGEGGFGNVYKGWLEDNPSSNNASGTVIAVKRLNSESLQEFAEWQAEVSILGCLSHPNLVKLLGYCRKEAEILLVYEFMQKGSLEHQLFRRGFAVQPLPWDVRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGAYNAKISDFGLVFGLGKLGPSPSRSHVTTMVMGTYGYADPEYVATGHLYVKSDVYAFGVVLVEMLTGLRAFDRRRSIEQHNLTDWIKPYLHDRRKLKSIMDSRLEGKYPSKAAFRIAQLSLRCLETKPKQRPSMKEVLESLERLHAANEKPMEPIFGSNHNHTR 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151382g00002 303 SUPERFAMILY Protein kinase-like (PK-like) 2 295 IPR011009 -
Stsc151382g00002 303 ProSiteProfiles Protein kinase domain profile. 1 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151382g00002 303 ProSitePatterns Protein kinases ATP-binding region signature. 3 33 IPR017441 GO:0005524
Stsc151382g00002 303 Gene3D Transferase(Phosphotransferase) domain 1 82 297 - -
Stsc151382g00002 303 CDD STKc_IRAK 3 283 - -
Stsc151382g00002 303 Gene3D Phosphorylase Kinase; domain 1 3 81 - -
Stsc151382g00002 303 PANTHER OS01G0588500 PROTEIN-RELATED 2 284 - -
Stsc151382g00002 303 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 81 293 - -
Stsc151382g00002 303 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Stsc151382g00002 303 Pfam Protein tyrosine and serine/threonine kinase 2 280 IPR001245 GO:0004672|GO:0006468
Stsc151382g00002 303 PIRSF ILK 13 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151382g00002 Stsc-Chr151382 6429 8545 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151382g00002 2 299 Receptor kinase-like Gene Family AT4G02010 45.695 1.79e-81 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc151382g00002 Pkinase 5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151382g00002 - - vun:114194495 478.404