Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151381g00003 ATGCTCTTGATGGACAATATACAAGACCGGAAGCTATGTGTTCTATTAGACTGGGATATGCGCTTCAAGATTATTTTGGGGATAGCTCGAGGTCTTCTTTACCTTCACGAAGATTCGAGATTAAGGATCATTCACAGAGACTTGAAAACAAGCAATATTCTATTGGATGAAGAGAAGAACCCGAAAATTTCAGATTTTGGCTTAGCTAGAATATTCGGAGGGAAAGAGACAGTAGCAAACACAGACAGAGTGGTTGGAACTTATGGATATATGTCTCCAGAATATGCACTTGACGGACATTTTTCGGTCAAATCCGATGTCTTTAGCTTTGGTGTCGTAGTTCTTGAGATCATCAGTGGGAAAAGAAACACTGGATTTTATCAAGCAGAACATGAATTGAGTCTTCTAGGATATGCATGGCATCTATGGAAAGTGGGAAGGGCATTGGAGTTCATGGACCAGACACTATGTGAAGCATGCAATGCTGATGAGTGCTTGAAGTGTGTGAATGTAGGGCTGCTATGCCTACAAGAAGATCCAAATGAAAGACCAAACATGTCCAACGTGGTCTTCATGCTTGGCAGTGAATCCAACACCCTTCCAAGTCCTAAGGAACCAGCCTTTGTAAAGAGGAGTTGCCCTTCTAGCAGAGCCTCTACTTCTAGTAAATTGGAAACCTTTTCAAGAAATGATTTGACTGTTACCTTAGAAAATGGCAGGTAG 723 0.4149 MLLMDNIQDRKLCVLLDWDMRFKIILGIARGLLYLHEDSRLRIIHRDLKTSNILLDEEKNPKISDFGLARIFGGKETVANTDRVVGTYGYMSPEYALDGHFSVKSDVFSFGVVVLEIISGKRNTGFYQAEHELSLLGYAWHLWKVGRALEFMDQTLCEACNADECLKCVNVGLLCLQEDPNERPNMSNVVFMLGSESNTLPSPKEPAFVKRSCPSSRASTSSKLETFSRNDLTVTLENGR 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151381g00003 240 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 2 201 - -
Stsc151381g00003 240 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 6 237 - -
Stsc151381g00003 240 SMART serkin_6 1 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151381g00003 240 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Stsc151381g00003 240 SUPERFAMILY Protein kinase-like (PK-like) 3 222 IPR011009 -
Stsc151381g00003 240 Pfam Protein kinase domain 17 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151381g00003 240 ProSiteProfiles Protein kinase domain profile. 1 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151381g00003 240 Gene3D Transferase(Phosphotransferase) domain 1 3 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151381g00003 Stsc-Chr151381 19065 20642 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151381g00003 16 235 Receptor kinase-like Gene Family AT4G23150 53.778 9.32e-83 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151381g00003 Pkinase 1.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151381g00003 - - gmx:100775297 439.884