Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151381g00002 ATGGAAGACACCATGAGAGGGATTACAAGGATAATTATCCTTAACTGGTGTTCTAACCACATGCTCTTTTTCTTCGTTTTGTGCTCATTCTTTTGCACTTGCATACATTGTTATGCAAGAGATACCATAACCATTAACACTTTCTTACTAGATGGAGGAGGAGAAGGAGGAGATACTCTAATTTCTGAAGGAGAAAACTTTGAGCTGGGATTTTTCACCCCTAATGGAAGCTCTAGTGTCAGAAGAAGATATATTGGAATATGGTACTACAATTTGAGTCCAAGAACAGTTGTGTGGGTGGCTAATAGGGACAACCCTCTCGAAGAATCCGGCGGCGCTTTCGGTATCTCAGAAGACGGTAATCTGAAGGTTCTGGACAGAAATGGTAGACCCTATTGGGGGACAAGTCTTGAAACAACATCAAATTCATCAGCACTTCACAGAACACTGAAGCTAATGAACAATGGTAACCTCATTGTAATTGATGAACAAGACCAAGAAGAAAACAAGAAGAAAACCAAGATCCTTTGGGAGAGTTTTGCTAATCCAACAGACACATTCCTTCCGGGGATGAAAATGCATCAGGGTTTAGCATTAACTTCGTGGCGAAGCAACATCGACCCTGCGCCGGGGAACTACTCTTTCGAGCGAGATCAAGAAGATAGCAGCAATGACAACAACAACGACCAATACATGATATGGAAGAGATCCATAAGGTATTGGAAAAGCAGTGTGACAGGTAAGGTAGTTGGAACAGGTGAAATGTCATTAGCAATATCTTATTTTCTTTCAAATTTCACTGAGAAAATCTCCCAAGACTACAACAACACAGTCCCTTTTCTCACTTCTTCACTGTATAGCAACACAAGGTTGGTTATGACTTACTGGGGTCAGCTTCTTTATCTGAAGATGGATTCAGAGAAAACTTGGTCTAATGTTTGGGTTGAGCCTAGAGATAGATGCAGTGTGTTCAATGCCTGCGGAAATTTCGGAAGTTGTAATAGCAAGTATGATGCTATGTGCAAGTGCTTGCCGGGGTTCAGGCCTAACTCTGTTGAGAGTTGGGATTCCCGTGATTTTTCCGGTGGATGCAGCCGGAAAACTAATGTGTGTGGCGAGGATGCTAAGAGTGACACGTTCTTGAGGCTGAAAATGATGAAAGTTGGGAACCCAGATGCACAGTTTAAGGCCAAGAATGAAGAAGAATGCAAGGCAGAGTGCCTTAACAACTGCCAATGCTATGCCTATTCGTATGAAGGCGATGAGACCGGAAGCAGCGACGGCGGCGGTGATGCTGTTTGCTGGATTTGGTCTGAGGACCTAAACAATCTAGAAGAAGATTATGAGAATGGCTGCGACCTCAATGTCCGTGTAGCGTTTTCTGACATAGAATCCACAAGGAAGAGTTGTGGAACTTGTGGCACAAACATCATTCCATATCCCCTAAGCAGAGGAGCAAATTGTGGTGACCCAATGTACCTTAGTTTCCATTGCAATGACTCCACCGGCCAGCTTGATTTTGAGACTCCGGGTGGTGCTTTTCCGGTGATTAGCATAGATCAGGATAAGCGAGAATTTGTTATTCACATTGAAGATATTCATAACTGTGAAGGACAAACATCAAGGGACAACAACAAGCTTCTGCTTCTCAAAGATTCATCTCCATTTCATCTTACTGGTACATGCTATGCTGATCCAAGAACCTTTACTTCTGCTGCTCCAATGAAACATGGAGTAGAGTTGGAACTGAGTTGGGATCCCCCGCCGGAGCCGATCTGCTCCACGATGCTGGATTGCATGGATTGGCCAAATTCAAGTTGCAATACCACAAGTGATGGCAAGAGGAGGTGCCTTTGCAACACTAACTATTTTTGGGATGGCATGAAATTGAACTGTACTAATGGCAATCAGAGCTACCAAACAGACAAGAATCTGTCCTTAACTCAGATCATGGAAATCACTTTTACAATTGTGATTGCCATCATTCTTCTCTCAAGTACTTTTATATATATCTACTTGAAGAAAAGGAGACAAGCCAATACACAAGAGATCAGGGCATATGCTCAGAAGAACACAGGCCTTAGCAGGTATGACAGTGAGAAATATGTAAGAGACTTGATTGAATCTGGTAGGTTCAAAGAAGAGAATTCACAGGCCATAGATATCCCACATTTTCATTTAGAAAGTGTTCTTGATGCTACTAATAACTTTGCAATTGCAAACAAGCTTGGACAAGGAGGGTTTGGTCCTGTTTATAAGGGAAAATTTCCCGGTGGACAAGAAATAGCCGTGAAGAGACTCTCGAGTTGTTCCGGACAAGGTTTAGAAGAGTTCAAAAATGAAGTTTTGTTGATCGCCAAACTTCAGCATCGGAACCTAGTTAGGCTTCTTGGTTATTGTCTTGAGGGAGATGAAAAGATGTTAATATATGAATACATGCCAAATAGAAGCTTAGATGGTTTTATATTTGGTAAGAGACTGAACAAAATTTAA 2493 0.4204 MEDTMRGITRIIILNWCSNHMLFFFVLCSFFCTCIHCYARDTITINTFLLDGGGEGGDTLISEGENFELGFFTPNGSSSVRRRYIGIWYYNLSPRTVVWVANRDNPLEESGGAFGISEDGNLKVLDRNGRPYWGTSLETTSNSSALHRTLKLMNNGNLIVIDEQDQEENKKKTKILWESFANPTDTFLPGMKMHQGLALTSWRSNIDPAPGNYSFERDQEDSSNDNNNDQYMIWKRSIRYWKSSVTGKVVGTGEMSLAISYFLSNFTEKISQDYNNTVPFLTSSLYSNTRLVMTYWGQLLYLKMDSEKTWSNVWVEPRDRCSVFNACGNFGSCNSKYDAMCKCLPGFRPNSVESWDSRDFSGGCSRKTNVCGEDAKSDTFLRLKMMKVGNPDAQFKAKNEEECKAECLNNCQCYAYSYEGDETGSSDGGGDAVCWIWSEDLNNLEEDYENGCDLNVRVAFSDIESTRKSCGTCGTNIIPYPLSRGANCGDPMYLSFHCNDSTGQLDFETPGGAFPVISIDQDKREFVIHIEDIHNCEGQTSRDNNKLLLLKDSSPFHLTGTCYADPRTFTSAAPMKHGVELELSWDPPPEPICSTMLDCMDWPNSSCNTTSDGKRRCLCNTNYFWDGMKLNCTNGNQSYQTDKNLSLTQIMEITFTIVIAIILLSSTFIYIYLKKRRQANTQEIRAYAQKNTGLSRYDSEKYVRDLIESGRFKEENSQAIDIPHFHLESVLDATNNFAIANKLGQGGFGPVYKGKFPGGQEIAVKRLSSCSGQGLEEFKNEVLLIAKLQHRNLVRLLGYCLEGDEKMLIYEYMPNRSLDGFIFGKRLNKI 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151381g00002 830 SUPERFAMILY Protein kinase-like (PK-like) 717 826 IPR011009 -
Stsc151381g00002 830 ProSiteProfiles EGF-like domain profile. 317 353 IPR000742 -
Stsc151381g00002 830 CDD B_lectin 59 183 IPR001480 -
Stsc151381g00002 830 ProSiteProfiles Protein kinase domain profile. 737 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151381g00002 830 ProSiteProfiles Bulb-type lectin domain profile. 45 173 IPR001480 -
Stsc151381g00002 830 Pfam Protein tyrosine and serine/threonine kinase 739 822 IPR001245 GO:0004672|GO:0006468
Stsc151381g00002 830 PIRSF SRK 593 830 IPR024171 GO:0004674
Stsc151381g00002 830 PIRSF SRK 14 481 IPR024171 GO:0004674
Stsc151381g00002 830 Gene3D Phosphorylase Kinase; domain 1 700 812 - -
Stsc151381g00002 830 SMART ntp_6 375 458 IPR003609 -
Stsc151381g00002 830 Pfam D-mannose binding lectin 96 194 IPR001480 -
Stsc151381g00002 830 Pfam S-locus glycoprotein domain 251 350 IPR000858 GO:0048544
Stsc151381g00002 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 97 208 IPR036426 -
Stsc151381g00002 830 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 25 828 - -
Stsc151381g00002 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 702 812 - -
Stsc151381g00002 830 Pfam PAN-like domain 374 443 IPR003609 -
Stsc151381g00002 830 Gene3D - 39 181 IPR036426 -
Stsc151381g00002 830 CDD PAN_AP_plant 371 459 - -
Stsc151381g00002 830 SMART blect_4 51 183 IPR001480 -
Stsc151381g00002 830 ProSiteProfiles PAN/Apple domain profile. 371 452 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151381g00002 Stsc-Chr151381 15842 19017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151381g00002 643 823 Receptor kinase-like Gene Family AT4G23320 48.066 4.09e-38 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151381g00002 S_locus_glycop 9.6e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151381g00002 - - gmx:100775297 1201.42