Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151379g00008 ATGGCGGATCTGTTGAGTGGAGGTGCTGTTGGAGCATTGATGGGAGAGGCTCTTCGAGCAGCAATTGAAACCATAAACAAAGGTCGAGAGTTCAGGCCAACACTTGAAAACAACATAGAAACCTTGAACTCCATAGCACCTCTGGTTGATGAGATGATGAGATACAACGACCAGTTAGATCGACCAAGACAAGAGATCCAGAGGCTTCAGCGTCGCGTACGTGAAGGACAAGAGCTTGCACGAAAGTGCTCCAAGTTAACTCGCTGGAAGTTTCTTTCCTTCCCTCACTTCCAGGGGAAGCTTAAGGCCGAGGACCGCTCACTCCAGAGGTTCTTGTCCATGGATGTTCAGGCTCAGAATGCCACGAACTTGATGGAGGTTCTTGTCAAGGTTGGGGAGATTTTGGACCTGCTTGGAAAACAGGATTTTGGCAAGTTCAGTGGCAGCCAGATTAAGGGTTTGAGTGGTGCTCCTGAAGAACCTAAGTGTATGGGGATGGATAAGCATTTGAGCAAGCTCAGAGTTGAGCTTCTCAAGGATGATGTCACTCTTCTTGTTTTGACTGGTTTGGGAGGTTCTGGAAAGAGCACTCTTGCTAAGAAGCTCTGTTGGGATCCACATGTTAAAGGCAAGTTCGGGGGGAACATATTCTTTGTCACATTTTCAGAAACGCCAAACGTGAAGAACATTGTACAGACACTATTCGAGCACTGCGGATGTAGGGTGCCTGAGTTTCAGAGTGATGAAGATGCCATCCACAAATTGGGATTTCTGATGAGACATGTTGGGAGAAATCCAACACTGTTAGTCCTTGATGATGTTTGGCAGAGCTCAGAGGCACTTGTTGAAAAGTTCAGATTTCAGATACCAGGTTATAAGATTTTGGTGACTTCAAGGGTTGCTTTTCAAAGATTTGGCACCCCATGGCCTTTGGAACCACTTGATCATGATGATGCAGTCCCCCTTTTCCGTCACTCCGCTCAACTTAATAGTAAATGCTTGTACATGCCAGATGATAATCTTCTCAATGAGATAGTGAAGGGTTGTAAGGGTTCACCATTGGCACTTGAAGTCATTGGTGGATCACTCTGTCAGCAGCCTTTTGAGGTATGGCAAGATATGAAAGAACGGTTAGAAAGGCAGTCGATTTTGGAGTCGAGTAATAAAGATTTGCTTTCGCGCCTCCAACAAAGTTTAGATATATTGGAAGATAAGTTCTCAGTTAGTGAGAAGGAGTGCTTCATGGATCTAGGCCTATTTCCAGAAGACCAAATGATCCCTGTTGCAATCCTCATTGATATGTGGGCTGAACTTCATAAACTTGATAAGGATGGAAGGAAAGCAATGACCATCATCCATGATTTAACCACCAGGAACTTGATTAAGCTCATAGTGACAAAGAAAGTTGCAAAGGACATAGACATGTACTACAATAACCACTTTGTTGTGCTACATGATCTTCTGAGAAAGCTGGCAATCCATCAGAGCGAGCGCGAACAAATTGATCAGAGAAAAAAACTAACAATTGAGTTAAATGGAGATGATCGTCCTGAATGGTGGGTAAGGCAAAACCAGCAAGGGATAGTCAGCCGCCTTTTTTCGTGGTCATTCTTACCCGGAAGGTTGACAGAACAAAAGCAGCTAAAGGTTGCTGCCAAAGTATTGTCTATATCAACTGATGAGAATTTTGCTTCGGATTGGTGTGACATGACAGCTGATGAAGCCGAGGTTGTCGTCTTAAATATTCGATCTAGCCAGTACAGCCTGCCACAGTTCATAGAGAAAATGAACAAACTTAAGGTTCTAATAGTCACAAATTACGGCTTCCATCGTTCTGAGGTAAACAATTTTGAGATGCTGAGTGATTTGTCTGACTTGAGAAGAATCAGATTGGAGAAAGTTTCAGTTCCTTCCTTTTGCATATTGAAGAGTCTGGTAAAACTGTCCCTTTATATGTGCAACACAAGCCAGGCTTTTGGGAACAGTTGTATCCCAATCTCAGAAGCCATGCCAAATCTAGTGGAGTTGAGCATTGACTATTGCAAAGATCTTGAGAAATTGCCAGAGGGAGTATGCAACATTACCCCACTGAAGAAGCTCAGCATCACCAACTGTCACAATCTTTCAACACTTCCTAAAGACACAGCAAATCTGAAGAACTTGGAAGTGCTAAGGCTAAGTTCATGTTCCGATTTGGAAGAGTTGCCGGACGGTATCGGACGACTTTGTAACCTGCGGTGTCTGGACGTATCAGACTGTGTAAGTCTGTCCAAATTGCCAGAGGACATTGGAGATCTGCAGAATCTTGAGAAACTCTACATGAAGGGTTGTTCAATGCTGAGTGAGGTGCCATACTCAGTCATGAACTTTGAGAATGCAAAACATGAAATAATTGTGTTATGTGACGAGGAAAGGGCTGCATTATGGGAAAATGTCCCCTCAATTCCCAATTTGAAGATAGAGACAGCTAAAGTAGACATCAGCTTGAATTGGCTTCATGGAGTTCGTTGCTGA 2514 0.4364 MADLLSGGAVGALMGEALRAAIETINKGREFRPTLENNIETLNSIAPLVDEMMRYNDQLDRPRQEIQRLQRRVREGQELARKCSKLTRWKFLSFPHFQGKLKAEDRSLQRFLSMDVQAQNATNLMEVLVKVGEILDLLGKQDFGKFSGSQIKGLSGAPEEPKCMGMDKHLSKLRVELLKDDVTLLVLTGLGGSGKSTLAKKLCWDPHVKGKFGGNIFFVTFSETPNVKNIVQTLFEHCGCRVPEFQSDEDAIHKLGFLMRHVGRNPTLLVLDDVWQSSEALVEKFRFQIPGYKILVTSRVAFQRFGTPWPLEPLDHDDAVPLFRHSAQLNSKCLYMPDDNLLNEIVKGCKGSPLALEVIGGSLCQQPFEVWQDMKERLERQSILESSNKDLLSRLQQSLDILEDKFSVSEKECFMDLGLFPEDQMIPVAILIDMWAELHKLDKDGRKAMTIIHDLTTRNLIKLIVTKKVAKDIDMYYNNHFVVLHDLLRKLAIHQSEREQIDQRKKLTIELNGDDRPEWWVRQNQQGIVSRLFSWSFLPGRLTEQKQLKVAAKVLSISTDENFASDWCDMTADEAEVVVLNIRSSQYSLPQFIEKMNKLKVLIVTNYGFHRSEVNNFEMLSDLSDLRRIRLEKVSVPSFCILKSLVKLSLYMCNTSQAFGNSCIPISEAMPNLVELSIDYCKDLEKLPEGVCNITPLKKLSITNCHNLSTLPKDTANLKNLEVLRLSSCSDLEELPDGIGRLCNLRCLDVSDCVSLSKLPEDIGDLQNLEKLYMKGCSMLSEVPYSVMNFENAKHEIIVLCDEERAALWENVPSIPNLKIETAKVDISLNWLHGVRC 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151379g00008 837 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 832 IPR039203 GO:0050832
Stsc151379g00008 837 PRINTS Disease resistance protein signature 349 363 - -
Stsc151379g00008 837 PRINTS Disease resistance protein signature 261 275 - -
Stsc151379g00008 837 PRINTS Disease resistance protein signature 184 199 - -
Stsc151379g00008 837 PRINTS Disease resistance protein signature 716 732 - -
Stsc151379g00008 837 Gene3D Ribonuclease Inhibitor 543 806 IPR032675 -
Stsc151379g00008 837 SUPERFAMILY RNI-like 586 789 - -
Stsc151379g00008 837 Gene3D - 314 397 IPR042197 -
Stsc151379g00008 837 Gene3D - 155 304 IPR027417 -
Stsc151379g00008 837 ProSiteProfiles RPW8 domain profile. 1 150 IPR008808 -
Stsc151379g00008 837 Pfam NB-ARC domain 167 400 IPR002182 GO:0043531
Stsc151379g00008 837 Coils Coil 52 72 - -
Stsc151379g00008 837 Coils Coil 484 504 - -
Stsc151379g00008 837 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 2 132 IPR008808 -
Stsc151379g00008 837 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 417 IPR027417 -
Stsc151379g00008 837 Coils Coil 392 412 - -
Stsc151379g00008 837 Gene3D - 398 495 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151379g00008 Stsc-Chr151379 40142 43433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151379g00008 621 786 WRKY Transcription Factor Family AT4G12020 27.647 6.65e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151379g00008 - - gmx:100792590 1164.83