Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151377g00006 ATGAACAACTATTGTACAATAAGCAGGGGAGATGGGGTTGGGTTTGAGTTTCTCATAAAGCCATATCATCCAAGTTTGCCTCTGTTGGTTCCCGTTTTAAGGTTGAGGCAATGTTTGCTGATCCTCTGGTCATTTAAATCAGAGGTCTATTCAGTATCAGCAGCAATTGTTGCTAGTCAGTCATTAATCTATGCTGCATTTTCCATCATCAAGCAATCTGTGGTGCTGGATTATTTTCCTTTTGGTATTTCCAGGGATTCTATGCACAAGAGGCGCGCCACTGGTAGCAAGAAGGTCTGGAGGAAGAAGAGAGAGTATTATTGCTTTATTTTTTTCATGTCTCCTGTTTTTCTTAATTTTTCTTATGGCATTTTGAATACACCATGA 387 0.3953 MNNYCTISRGDGVGFEFLIKPYHPSLPLLVPVLRLRQCLLILWSFKSEVYSVSAAIVASQSLIYAAFSIIKQSVVLDYFPFGISRDSMHKRRATGSKKVWRKKREYYCFIFFMSPVFLNFSYGILNTP 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151377g00006 128 Pfam K+ potassium transporter 49 80 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151377g00006 Stsc-Chr151377 29218 30901 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151377g00006 81 106 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 77.778 2.19e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151377g00006 K03549 - mof:131145067 51.2174