Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151377g00005 ATGCCTATGATCAAGACCCTTATGCTAAGGAGTTTGGAATCAAGATCAGTGAAAATCTTACTCAAGTTGAAGCTCGCATCCTTCCTCCACCCTGGGGGAGATGGGGTTGGGTTTGAGTTTCTCATAAAGCCATATCATCCAAGTTTGCCTCTGTTGGTTCCCGTTTTAAGGTTGAGGCAATGTTTGCTGATCCTCTGGTCATTTAAATCAGAGGTCTATTCAGTATCAGCAGCAATTGTTGCTAGTCAGTCATTAATCTATGCTGCATTTTCCATCATCAAGCAATCTGTGGTGCTGGATTATTTTCCTTTTGGTATTTCCAGGGATTCTATGCACAAGAGGCGCGCCACTGGTAGCAAGAAGGTCTGGAGGAAGAAGAGAGAGTATTATTGCTTTATTTTTTTCATGTCTCCTGTTTTTCTTAATTTTTCTTATGGCATTTTGAATACACCATGA 456 0.4101 MPMIKTLMLRSLESRSVKILLKLKLASFLHPGGDGVGFEFLIKPYHPSLPLLVPVLRLRQCLLILWSFKSEVYSVSAAIVASQSLIYAAFSIIKQSVVLDYFPFGISRDSMHKRRATGSKKVWRKKREYYCFIFFMSPVFLNFSYGILNTP 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151377g00005 151 Pfam K+ potassium transporter 72 103 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151377g00005 Stsc-Chr151377 27823 30901 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151377g00005 104 129 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 77.778 3.82e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151377g00005 K03549 - mof:131145067 51.2174