Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151377g00004 ATGGTGAGCATCCAATCTCAACACACTATCATCCCTTCCTCTCCAACCCCAAACGGAAAACTCTTTTCCCTCTGCGAGCAAACCAAGCTTCGCACTCATGCTCCTCTTCTCTATGCATATGGCAACGCTTCATTGCGGTCGTCGCTGTCGCCGTCATCAACTCTCAATTGCCATGTCTTTCACACGCTCATGATTTCTCTCGGGAAAGCTTTGTCAATCTACTACCCGCTAGCGGGTAGGTTGAGATTCATCGACGGTTCGAGGTGGGAGATTAATTGCAACGCCAAGGGAGCGTTGTTAATTGACGCATTTTGCAACGGGAAGAGCATGTATGATTTCTGTGGCGACGATTTTCTACCTACCGGTTTGGTTTCGCAGCTAATGCCCAAAATAGATTATGATGCTCCCCTTGACGACACGCCCTTTCTGGTGGTGCAGGTCACGCGCTTCAATTGCGGCGGTTTCACCATAGGCGTGGCCATGTGTCGCGCCGTCATTGACGGAATGGCAACCATACGGTTCATGAACACGTGGGCTAAGTTAGCCAGAGGAGAATCTTTGGATCCATCTGAACGATTCCCATGCTATGATCCAAGTTTGTTAAACTCACGCGCGTTGTTGCCTTCCAAGAATGTTAATAATTTGCATGAGCATCATTTAGACATATTTGGAACTCCACCTCCATGGTTAGGCACATTTAGACAAGACTCAAGAGTTGCCGTTCAAGTTGTCAAACTCACAAAAGAACAAGTCAACAAACTCAAGATGAAAGCCGCAATTGAAAACGGCAAGAGTGCTCCGTTTTCGAGTTTCGAGATCATTGCGGCGATTTTATGGAGGTGTGTCACCAAAGCACGCTACCAAGGAAAAGGCGATCAACCTACAAGGTTGACCACCTTGGTCAATTGTCGTAACCGTCTAAAACCACCACTCCCTGATAATTATTCAGGGAATGCTGTGTTTCCGACTGTTACGACCTGCTCCTTCACTGACCTGATGCAGAATCCTTTAAGTTCTACAGTAGGAAAAGTGAAGGACGCGATAGCTAGAGTGGACGACAGGTTCGTGAGAGAAGCACTTGTTTGCATTCGTAATACGAAGGATATGGATTTGGTGAGGTATAACGTTCATTACCCGGCTAAGAGTGTTCTTAAGGGAGCGTTTAAGGGTAATCCAAACTTGTTTATTGTTAGCTGGATGAATTTCTCGTATAAATTTCTGGATTTTGGGTTCGGAGAACCGGTTCATTTTGGACCCGGTTATATGGATTCCGAAGGGAAGGCTTTCGTCACTAACAATGTTAGTGGTGATGGATTCAACGTGGCTATTGCTTTGGATTCATCTCACATGGATGCTTTCAAGAAATTCTTTTATGAAGAAATAATCCAAGAGGTGTTTGTTCCTATTTCCAAATTGTGA 1419 0.4538 MVSIQSQHTIIPSSPTPNGKLFSLCEQTKLRTHAPLLYAYGNASLRSSLSPSSTLNCHVFHTLMISLGKALSIYYPLAGRLRFIDGSRWEINCNAKGALLIDAFCNGKSMYDFCGDDFLPTGLVSQLMPKIDYDAPLDDTPFLVVQVTRFNCGGFTIGVAMCRAVIDGMATIRFMNTWAKLARGESLDPSERFPCYDPSLLNSRALLPSKNVNNLHEHHLDIFGTPPPWLGTFRQDSRVAVQVVKLTKEQVNKLKMKAAIENGKSAPFSSFEIIAAILWRCVTKARYQGKGDQPTRLTTLVNCRNRLKPPLPDNYSGNAVFPTVTTCSFTDLMQNPLSSTVGKVKDAIARVDDRFVREALVCIRNTKDMDLVRYNVHYPAKSVLKGAFKGNPNLFIVSWMNFSYKFLDFGFGEPVHFGPGYMDSEGKAFVTNNVSGDGFNVAIALDSSHMDAFKKFFYEEIIQEVFVPISKL 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151377g00004 472 Gene3D - 232 460 IPR023213 -
Stsc151377g00004 472 Gene3D - 1 219 IPR023213 -
Stsc151377g00004 472 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 457 - -
Stsc151377g00004 472 Pfam Transferase family 1 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151377g00004 Stsc-Chr151377 17773 19538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151377g00004 2 459 Monolignol Biosynthesis Gene Families AT5G48930 33.405 3.01e-71 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151377g00004 K13065 - gmx:100775549 530.02