Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151374g00004 ATTAGAAGGTATGTGTATCATGATGTCATAAGGTTGGATGATGCTGCAAAGTTAATTGACTGCACTTCTGTTCAAGCATACACGACGAACAGCGCAAAAGTGGTGTTTATAAAAGAAAGGGTACAGACAAGGAACAACTTCAGGGGTAATTCCGGCAATTCGTGCAGCACTTGCGACAGAACACTGCAAGACCCATACCAATTCTGCTCACTCTCTTGCAAGATCAAATATCTTATTGGAACTAGGGGTGGTCTCTCTGGGTACCTATATGAGTGCAACTATTTGCCCTTCATTGAAACCGGGTTTGATGAGGGTCAATTGACAACTGACTCGGTTCTTGAACCGGCTGGTTCGGTTTTGACCTCATCCGGTTCAGGGGGATGTGTTGGTGGAGTTGATTGTAGGGCCACCCTAGCTTGCACTGCCACCACCGAAGTTGTGAGGAGAAAGCGAAGTTCCGGTTCGGCGTCTCATCCATCTGCACCGGTTTGTCGACCGGCTCATGACATTTCGGTTTGTCTTCCGAACCGGCGGAAAGGGACCCCACAGAGGGCCCCACTTTATTAA 567 0.4832 IRRYVYHDVIRLDDAAKLIDCTSVQAYTTNSAKVVFIKERVQTRNNFRGNSGNSCSTCDRTLQDPYQFCSLSCKIKYLIGTRGGLSGYLYECNYLPFIETGFDEGQLTTDSVLEPAGSVLTSSGSGGCVGGVDCRATLACTATTEVVRRKRSSGSASHPSAPVCRPAHDISVCLPNRRKGTPQRAPLY 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151374g00004 188 Pfam PLATZ transcription factor 2 75 IPR006734 -
Stsc151374g00004 188 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151374g00004 Stsc-Chr151374 40223 42400 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Stsc151374g00004 PLATZ 3.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151374g00004 - - pvu:PHAVU_008G142900g 270.396