Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151370g00010 ATGGGAAGAACCTCCTCACTGTGCAACCTCTTCTCTTGCTTCGCACCACCCTCCGCCAACGACCGCCACCAACAACCACCCGACCTCGCATTCCAAGAAACCGAACCGCTCGACGAAACCCTAGGTCACTCCTTCTGCTACGTCAGATCCTCAAATCGCTTTCTCTCTTCTCCCACTCACTCACCCTCTCATTCCGATCGCTTCCTCACTTCCCCTTCCGCCTCCCTCCGCTTCTCCCCAACCCACACCGAACCCGTTTTCAAGTCCATTTCCGGTGCCTCTGTCAGCGCCAACAGCTCTGCTCCCAAAACCGTTCTCCAATTTGACGCTGATGCGGCAGCTGGTTTCCCTCCCAGGGGCAGTATCGTAAATGGATTTGAAGCTACGTCGTCGTTTAGCGCGCTCCCGCTTCAACCAGCTCCAAGAGGCAATGGTGAGCCCTCTGGAAGGGCCTTCTTCCTCTCCGGTCCAATCGAGAGCGGAGCTATGTCCGGTCCGCTTGACGCCGCCGCTGCCGCCGAAGGGGGAGGACCTGCCTCTGCCGCCGGTGTTCCTTTCTCGGCGCCGCTGGGTGGGTTGTACGCCAAGAAGAAGCGGAAGAAAGGGATCCCTGGGCTTAGGAAGGCGTTCCACCGGAGGAGCCTCTCGGAGATGAAACGGCCTTGGGTGGTGCCCGTTCTGAACTTCGTCGGGAGGAAGGAAGATCCGCCGGAGATTGAAGGAGGGAGTGGGGCTGCAGCGGCGGAGGCGGGGAAGGGCGAGTGCAATGTGCAATGGGCGCTGGGGAAGGCAGGGGAGGATCGCGTGCACGTGGTGGTATCGGAGGAGCAGGGTTGGTTGTTTGTGGGGATCTATGACGGCTTCAACGGTCCTGATGCGCCGGAGTTCTTGATGGGTCACCTGTACCGTGCTGTACACAGTGAACTTCAGGGGTTGTTTTGGGAAGTTGAAGAAGAAAAAGAAGTGGAAGCTAACCCCTCGAGTGAACCTGCATCTGCACATGCAGCTGAATCGTCAATGGCGGTTGAAGAAGACTCCAAGGACGATGGAGGGTCATCAAAGAGAGTGACATTTCAAGTGGAGGGAACGGAGAGCAGGCGGCGCAGGCTGTGGGAGCTTCTTGCAGAGGATGCTGCTGAAGATGGGCTTGATCTTTCGGGTTCAGACAGGTTTGCATTTTCGGTTGATGATGCACTCAGCGTGAGCAAGGAGGGCTCATCGGGTAGTAGAAGGTGGATGGTGTTATCAAAATTGAAGCATGGATTGTCGAAGCACAAGGAGGGCCGTGGAGGGAAGTTGTTACCTTGGAACTTGGCCACGGAAGATAAAGAAAAGGTTGAGGTGGAAACCCGGGCAGAAGAGAAATCTCATGGTGGTGAAGGCACTGGCACTGACAATGGCAATGGCGGTGGTAGGAGACGGAAAGTGGGACCGGTGGATCATGATCTTGTTTTGAGGGCATTGTCTCGGGCACTTGAGATGACAGAACTCGCATATTTGGATATGACGGATAAGGTTATAGATACGAACCCGGAGCTTGCTCTGATGGGGTCTTGCCTGCTGGTTGCTTTGATGAGGGGCGAGGATGTGTATGTGATGAACGTGGGTGATAGCAGGGCCATTGTTGCTCAGTATGAGCACATAGAAGTTGGTTGCAGCAAGGGATCCGGAAGTAATGGGGATGTTGGGTCAGGTACAGAGAGCATTACAGTGGAGTCTTCATTAGGCCAAGGTGAACATGCCACCAGGTCAGGGAAGGAGGGTCCTGCTCAGGAAATGAGGTTGGTGGCATTGCAGTTGTCCACTGACCACAGCACCAGTGTTGAAGAGGAAATCATTAGGATCAAGAATGAACATCCTGATGATAGCCACTGTATTGTAAATGATAGAGTGAAAGGCCGTCTTAAGGTCACCAGAGCATTCGGGGCAGGATTTTTGAAACAGGTTTCTTTAAAATTGTTTCATTATAGCAATTATTAA 1980 0.5399 MGRTSSLCNLFSCFAPPSANDRHQQPPDLAFQETEPLDETLGHSFCYVRSSNRFLSSPTHSPSHSDRFLTSPSASLRFSPTHTEPVFKSISGASVSANSSAPKTVLQFDADAAAGFPPRGSIVNGFEATSSFSALPLQPAPRGNGEPSGRAFFLSGPIESGAMSGPLDAAAAAEGGGPASAAGVPFSAPLGGLYAKKKRKKGIPGLRKAFHRRSLSEMKRPWVVPVLNFVGRKEDPPEIEGGSGAAAAEAGKGECNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHLYRAVHSELQGLFWEVEEEKEVEANPSSEPASAHAAESSMAVEEDSKDDGGSSKRVTFQVEGTESRRRRLWELLAEDAAEDGLDLSGSDRFAFSVDDALSVSKEGSSGSRRWMVLSKLKHGLSKHKEGRGGKLLPWNLATEDKEKVEVETRAEEKSHGGEGTGTDNGNGGGRRRKVGPVDHDLVLRALSRALEMTELAYLDMTDKVIDTNPELALMGSCLLVALMRGEDVYVMNVGDSRAIVAQYEHIEVGCSKGSGSNGDVGSGTESITVESSLGQGEHATRSGKEGPAQEMRLVALQLSTDHSTSVEEEIIRIKNEHPDDSHCIVNDRVKGRLKVTRAFGAGFLKQVSLKLFHYSNY 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151370g00010 659 MobiDBLite consensus disorder prediction 444 460 - -
Stsc151370g00010 659 SUPERFAMILY PP2C-like 262 647 IPR036457 -
Stsc151370g00010 659 Gene3D - 246 658 IPR036457 -
Stsc151370g00010 659 ProSiteProfiles PPM-type phosphatase domain profile. 251 659 IPR001932 -
Stsc151370g00010 659 Pfam Protein phosphatase 2C 492 549 IPR001932 -
Stsc151370g00010 659 Pfam Protein phosphatase 2C 599 648 IPR001932 -
Stsc151370g00010 659 PANTHER PROTEIN PHOSPHATASE 2C 252 647 IPR015655 GO:0004722|GO:0006470
Stsc151370g00010 659 CDD PP2Cc 480 648 IPR001932 -
Stsc151370g00010 659 MobiDBLite consensus disorder prediction 444 477 - -
Stsc151370g00010 659 MobiDBLite consensus disorder prediction 320 360 - -
Stsc151370g00010 659 MobiDBLite consensus disorder prediction 557 580 - -
Stsc151370g00010 659 MobiDBLite consensus disorder prediction 556 589 - -
Stsc151370g00010 659 SMART PP2C_4 248 658 IPR001932 -
Stsc151370g00010 659 MobiDBLite consensus disorder prediction 340 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151370g00010 Stsc-Chr151370 49716 52762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151370g00010 5 652 PP2C-type Phosphatase Gene Family AT2G35350 52.143 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151370g00010 - - gmx:100775371 746.117