Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151370g00008 | ATGGGAGGGGCATCACTGCCTCCAGGTTTTCGTTTCCACCCCACTGATGAAGAACTGATAGGATACTACCTGAAAAGAAAAGTTGATGAGCTTGAAATTGAACTTGAAGTTATCCCTGTCATTGATTTGTACAAGTTTGATCCTTGGGAGTTGCCTGAGAAATCATTCCTACCAAAAAGAGACTTGGAATGGTTCTTCTTCTGCCCAAGGGATCGAAAGTATCCGAATGGTTCAAGAACAAACAGAGCTACCAAAGCTGGATACTGGAAAGCCACTGGAAAAGACAAGAAGGTTGTGTGCCAATCTAATCCCTCAACATCAATCATGAAAGCCACCGGATATCGCAAGACCCTTGTTTTCTATCGTGGAAGAGCTCCTTTAGGTGATCGAACCGATTGGGTTATGCACGAGTATCGCCTCTGCGATGATCTTGGCCAGGACTCACCAAGTTTTCAGGGTGCTTATGCTTTGTGCCGGGTTATTAAGAAGAGTGACAAGGCCAGTGATTGCAAGGGTAAAAGAGGTGTCAGCAGTTCCAAGAATGAGAATGAGAGCTCAATGAGATTGTCATGCTCTAAGGAGAACTTGAGCATCTCTGCTGACATTTCTTCTCAAGCAAGTCAGCTATGCAGTGAGAGTCGTTATTCAAGCCCTATAGCTTCTCCTTGTGCTGATAATGTGGCTGCAACGGCCGCGTTTGAGCCACCTTCTGTGGACACTAATCCTTCAAGCTTCTTGGTCTCCCCTGATATGATCCTTGATTCTTCGAAGGTATTGTGTTTTTCAGTAAAAGATTGA | 798 | 0.4474 | MGGASLPPGFRFHPTDEELIGYYLKRKVDELEIELEVIPVIDLYKFDPWELPEKSFLPKRDLEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDKKVVCQSNPSTSIMKATGYRKTLVFYRGRAPLGDRTDWVMHEYRLCDDLGQDSPSFQGAYALCRVIKKSDKASDCKGKRGVSSSKNENESSMRLSCSKENLSISADISSQASQLCSESRYSSPIASPCADNVAATAAFEPPSVDTNPSSFLVSPDMILDSSKVLCFSVKD | 265 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151370g00008 | 265 | PANTHER | PROTEIN CUP-SHAPED COTYLEDON 2-RELATED | 5 | 204 | - | - | |
Stsc151370g00008 | 265 | FunFam | Nac domain-containing protein 86 | 15 | 166 | - | - | |
Stsc151370g00008 | 265 | Pfam | No apical meristem (NAM) protein | 7 | 140 | IPR003441 | GO:0003677|GO:0006355 | |
Stsc151370g00008 | 265 | Gene3D | NAC domain | 15 | 168 | IPR036093 | GO:0003677|GO:0006355 | |
Stsc151370g00008 | 265 | ProSiteProfiles | NAC domain profile. | 6 | 163 | IPR003441 | GO:0003677|GO:0006355 | |
Stsc151370g00008 | 265 | SUPERFAMILY | NAC domain | 4 | 163 | IPR036093 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151370g00008 | Stsc-Chr151370 | 38372 | 40337 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151370g00008 | 1 | 257 | NAC Transcription Factor Family | AT4G17980 | 59.459 | 1.45e-101 | 296 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Stsc151370g00008 | NAM | 7.2e-39 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151370g00008 | - | - | adu:107487585 | 491.115 |