Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151369g00006 ATGATTGCTTCTCATTCACTAAGTGAATCAACGCCTAGTAGTTCAACAATTGAGGCTCCACTGACTATACATGCTCCAGTTTGCAATTCATCTAGAACTTCTAACAAGAGCTCACAATCTACTAGTTTGATGCAAGGGACAGAGATTATTTTTCCAGTTACTATTAAGAGACAGACACTGCCAAATGTATCATCAACAGACAATATTGAAAGCAAGGGATTAGATGGCAGTAACATGGCTTCCAAGAAGAGGAGAATGGCATGGTCAGAGGAAGAGGACAATCTGCTACGAGATGCTGTTCAAAGATTTGGTGAAGGGCATTGGGCTACCATTGCAAAAGGAGAAAACTTTCCTGTTAAGAGAACTGCTACACAGATTTCTCACAGGTGGAACTTCTTGCGAAAGAAAGATGATAGTACCAATTCAGGAACCATCTCGACCAGCACGCGTTATAATACTGCTGAACAATTGGCAACTCGTCACTCGTTATCTTTAGCGCTTGATATGCCATTGGAAAAGTTAACTTCTCCTGGAGTGAACAGTAGGAGACCCTTGAACATGTCTGGTAAAAGCTCATTGCAGCATGTTGGTATAGAATCTTCAACGCTTCATAGTAATGTTGTACCACCCCAGCATCCTTCTCAACAATCTTTGGTGGGATCTTGTGGTTCCTCACTGAAATCTACATTAGTCTCTGAAAAACCGTTGTCGGAAGTTACCCCAACTCTTAACCCTATGGTAAAAGGCACCACAGTGGTCTCTGGTGCCCAAATAGTTTCATCGTCGGATTCTGCATCATGTGTAAAGGTTTCGCATGGAAATGTGGCTGCTACAACAAATAGTTCTTTGACAAAGTCATCAACTCCTGCTCGTTTGCCTCCGAAATCAAAGATACAATTCCGCACAGGTCCAAGTTCAGCACCTGTTCGCACCCAATCAACTATTGTTATTGCCTGTCCTGCATCAGGCATTAAACCCCCTAAAGCTTCCTCTTTGACAATGGAGAAGTCGCCTGCAGCTTTGTCTACCTCATCTGAGCAGGAAAAACATGATAACTCTCTGGTTTATGAAGCTCCAACAAAGCAAGAAGTTCGAGTTTCTAATCCTAATCGCATGCATAGTCCTCCCAAAGAAGGTAAGACCAAAGTAAAGGAAATTACAAGAAGTAAGGAGGAAGAAACAGAAGGGAATAAATCAGGGAACTGCTAA 1209 0.4235 MIASHSLSESTPSSSTIEAPLTIHAPVCNSSRTSNKSSQSTSLMQGTEIIFPVTIKRQTLPNVSSTDNIESKGLDGSNMASKKRRMAWSEEEDNLLRDAVQRFGEGHWATIAKGENFPVKRTATQISHRWNFLRKKDDSTNSGTISTSTRYNTAEQLATRHSLSLALDMPLEKLTSPGVNSRRPLNMSGKSSLQHVGIESSTLHSNVVPPQHPSQQSLVGSCGSSLKSTLVSEKPLSEVTPTLNPMVKGTTVVSGAQIVSSSDSASCVKVSHGNVAATTNSSLTKSSTPARLPPKSKIQFRTGPSSAPVRTQSTIVIACPASGIKPPKASSLTMEKSPAALSTSSEQEKHDNSLVYEAPTKQEVRVSNPNRMHSPPKEGKTKVKEITRSKEEETEGNKSGNC 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151369g00006 402 MobiDBLite consensus disorder prediction 335 349 - -
Stsc151369g00006 402 Pfam Myb-like DNA-binding domain 85 132 IPR001005 -
Stsc151369g00006 402 Gene3D - 77 141 - -
Stsc151369g00006 402 MobiDBLite consensus disorder prediction 279 318 - -
Stsc151369g00006 402 ProSiteProfiles Myb-like domain profile. 80 134 IPR001005 -
Stsc151369g00006 402 MobiDBLite consensus disorder prediction 279 402 - -
Stsc151369g00006 402 SUPERFAMILY Homeodomain-like 83 136 IPR009057 -
Stsc151369g00006 402 CDD SANT_TRF 88 135 - -
Stsc151369g00006 402 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 138 IPR017930 -
Stsc151369g00006 402 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 386 - -
Stsc151369g00006 402 MobiDBLite consensus disorder prediction 375 402 - -
Stsc151369g00006 402 SMART sant 84 136 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151369g00006 Stsc-Chr151369 25087 27977 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc151369g00006 Myb_DNA-binding 4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151369g00006 - - aip:107606216 560.451