Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151369g00004 ATGGTGTGGCGCCACTTGGCCTACCGTCATGCCCTTGCCGAAAATCTTGAAGACGGTGCTGAACCTCTGGATGATGATAGTGACCTAGAGTGCGAGCTGGAAGTATCGCCCCCAGTAAGTGCTGAATCTGTATCGGAGGCTGCAGCATGTGTGAAGGTAATGGTTGCTTCACGCACGCTGAGTGAATCAACCCCGAGTAGCTCAACGATTGAGGCTCCACTGACTATAACTGTTCCGGTTTGCCATTCATCTAAAACTCCTAGCGAAAGTTCACACTCATCTAATTTGATGCAAGGGACGAATGCTATTTTTCCAGTTACTGTTCAGAGACAAACACTGCCAACTGCACCATCAACGGATGGTATTGAGGCCAAGGGATTAGGTGGTGGCAACATGGCTTCCAAAAGGAAGAGAAAAGCATGGTCAGAGGAAGAGGACATCCAGTTACGAGCGGCTGTTCAGAGATTTGGTGAAGGGAATTGGGCTAACATGGCCAAAGGAGATAACTTTCCTATTAAGAGAAGTCCTACTCAATTGGCTCAGAGGTGGAGCATTTTAAGAAAGAAAGATGGAACTGTCAATTCGGGAAGCGTCGTGACAAGCACAACTTATACTACAGCCGAACAGCTGGCAACTCGTCACTCCTTATCTTTAGCTCTTGATATGCCATTCAAAAAGTTAACTGCTCTTGGAACTACTGATCAAGCCAAGACATCCTTAAATTCAAGTAAAATCCAAGTACAGCGTAATGCTACCACAACAACAACACAAAGTAGTTTAGAACCACCACATAAGCAATCAATACTAAAAGGTAATCCAATTTCAAATCCTGGATTAAAAGCTACTGCAGTTGCTGTTGGTGCCAGAATTGTTTCTCCATCAAATATGACATCACAACTAAAGGTTGCACAAGCAAGAAATGCTGTTCCGGCAACAAATATATCATTGGCAAAGCCATCTACTTCAACCGGTTTGTCTTCCGAATCGGAGGTACAAGCTCACACAGGTTCAAGTGTTTCACATGTTCTCCCTCAGTCTGGACGTGTTCCATCTCAGTCTTCACCTGCACCCTCCCAATCAATTGCTGCTATAACATCTCCGCCGTCTTCCTCTAGTACAGTTAAAGCTGCCTCTTCTACAGTGTCTGAGAAGGACAAACTGGTTACCCCTTTGGTTAACAAAGTTCCAATAAAGCAAGAAGCTAATACTACAGATGAATTGCGAGATTCAAAGCCTAGCCCGGCACCAAAAGAGACTACTTCATATGAATTACGAGATTCAAAGCCTAGCCCAACACTGAAAGAGACTGTTCAAAATGATGAGAAATTAAGTCAAGACAAGAGCATGAATATTCCGGTTAAAGAGAGTGTTCCTTCTATTGTGGCAAGTAAAGGAAAGGAGGAAGTAGACGATAAAGGAGTGCCAAAAAAGCAAGTCAAGTCTGAAGATCAAGGAAACAATGGGAGCCATGATTTAGATAAAGAAAAGGGAAAAAATTCAATTAATGGAAGCTCCCAGGATCAAAAGGTGGATGAAATGCAAGAGGATGAGAAGCAAGAAAATTTGCAGAACTAG 1575 0.4337 MVWRHLAYRHALAENLEDGAEPLDDDSDLECELEVSPPVSAESVSEAAACVKVMVASRTLSESTPSSSTIEAPLTITVPVCHSSKTPSESSHSSNLMQGTNAIFPVTVQRQTLPTAPSTDGIEAKGLGGGNMASKRKRKAWSEEEDIQLRAAVQRFGEGNWANMAKGDNFPIKRSPTQLAQRWSILRKKDGTVNSGSVVTSTTYTTAEQLATRHSLSLALDMPFKKLTALGTTDQAKTSLNSSKIQVQRNATTTTTQSSLEPPHKQSILKGNPISNPGLKATAVAVGARIVSPSNMTSQLKVAQARNAVPATNISLAKPSTSTGLSSESEVQAHTGSSVSHVLPQSGRVPSQSSPAPSQSIAAITSPPSSSSTVKAASSTVSEKDKLVTPLVNKVPIKQEANTTDELRDSKPSPAPKETTSYELRDSKPSPTLKETVQNDEKLSQDKSMNIPVKESVPSIVASKGKEEVDDKGVPKKQVKSEDQGNNGSHDLDKEKGKNSINGSSQDQKVDEMQEDEKQENLQN 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151369g00004 524 MobiDBLite consensus disorder prediction 431 452 - -
Stsc151369g00004 524 SUPERFAMILY Homeodomain-like 136 189 IPR009057 -
Stsc151369g00004 524 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 133 191 IPR017930 -
Stsc151369g00004 524 MobiDBLite consensus disorder prediction 115 139 - -
Stsc151369g00004 524 MobiDBLite consensus disorder prediction 464 500 - -
Stsc151369g00004 524 MobiDBLite consensus disorder prediction 509 524 - -
Stsc151369g00004 524 MobiDBLite consensus disorder prediction 237 273 - -
Stsc151369g00004 524 Gene3D - 131 192 - -
Stsc151369g00004 524 MobiDBLite consensus disorder prediction 319 524 - -
Stsc151369g00004 524 MobiDBLite consensus disorder prediction 319 386 - -
Stsc151369g00004 524 MobiDBLite consensus disorder prediction 237 276 - -
Stsc151369g00004 524 CDD SANT_TRF 139 188 - -
Stsc151369g00004 524 Pfam Myb-like DNA-binding domain 138 183 IPR001005 -
Stsc151369g00004 524 ProSiteProfiles Myb-like domain profile. 133 187 IPR001005 -
Stsc151369g00004 524 SMART sant 137 189 IPR001005 -
Stsc151369g00004 524 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 518 - -
Stsc151369g00004 524 Coils Coil 510 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151369g00004 Stsc-Chr151369 18478 23315 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc151369g00004 Myb_DNA-binding 1.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151369g00004 - - adu:107460964 668.307