Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151369g00003 ATGCCGGAGAAGTCCAGGAAGGTACCTTTCACGGAACAAGACTCAGCAAAACTCCTAGAAAGGTATGATGCAACGACGGTGTTAACTTTGCTTCAGGAACTGGCGCACTATCCTCACGCGAAGATCGATTGGAATGAGTTGGTGAAGAACACATCAACTGGGATTTCTACCGCCAGAGAGTATCAGATGGTGTGGCGCCACTTGGCCTACCGTCATGCCCTTGCCGAAAATCTTGAAGACGGTGCTGAACCTCTGGATGATGATAGTGACCTAGAGTGCGAGCTGGAAGTATCGCCCCCAGTAAGTGCTGAATCTGTATCGGAGGCTGCAGCATGTGTGAAGGTAATGGTTGCTTCACGCACGCTGAGTGAATCAACCCCGAGTAGCTCAACGATTGAGGCTCCACTGACTATAACTGTTCCGGTTTGCCATTCATCTAAAACTCCTAGCGAAAGTTCACACTCATCTAATTTGATGCAAGGGACGAATGCTATTTTTCCAGTTACTGTTCAGAGACAAACACTGCCAACTGCACCATCAACGGATGGTATTGAGGCCAAGGGATTAGGTGGTGGCAACATGGCTTCCAAAAGGAAGAGAAAAGCATGGTCAGAGGAAGAGGACATCCAGTTACGAGCGGCTGTTCAGAGATTTGGTGAAGGGAATTGGGCTAACATGGCCAAAGGAGATAACTTTCCTATTAAGAGAAGTCCTACTCAATTGGCTCAGAGGTGGAGCATTTTAAGAAAGAAAGATGGAACTGTCAATTCGGGAAGCGTCGTGACAAGCACAACTTATACTACAGCCGAACAGCTGGCAACTCGTCACTCCTTATCTTTAGCTCTTGATATGCCATTCAAAAAGTTAACTGCTCTTGGAACTACTGATCAAGCCAAGACATCCTTAAATTCAAGTAAAATCCAAGTACAGCGTAATGCTACCACAACAACAACACAAAGTAGTTTAGAACCACCACATAAGCAATCAATACTAAAAGGTAATCCAATTTCAAATCCTGGATTAAAAGCTACTGCAGTTGCTGTTGGTGCCAGAATTGTTTCTCCATCAAATATGACATCACAACTAAAGGTTGCACAAGCAAGAAATGCTGTTCCGGCAACAAATATATCATTGGCAAAGCCATCTACTTCAACCGGTTTGTCTTCCGAATCGGAGGTACAAGCTCACACAGGTTCAAGTGTTTCACATGTTCTCCCTCAGTCTGGACGTGTTCCATCTCAGTCTTCACCTGCACCCTCCCAATCAATTGCTGCTATAACATCTCCGCCGTCTTCCTCTAGTACAGTTAAAGCTGCCTCTTCTACAGTGTCTGAGAAGGACAAACTGGTTACCCCTTTGGTTAACAAAGTTCCAATAAAGCAAGAAGCTAATACTACAGATGAATTGCGAGATTCAAAGCCTAGCCCGGCACCAAAAGAGACTACTTCATATGAATTACGAGATTCAAAGCCTAGCCCAACACTGAAAGAGACTGTTCAAAATGATGAGAAATTAAGTCAAGACAAGAGCATGAATATTCCGGTTAAAGAGAGTGTTCCTTCTATTGTGGCAAGTAAAGGAAAGGAGGAAGTAGACGATAAAGGAGTGCCAAAAAAGCAAGTCAAGTCTGAAGATCAAGGAAACAATGGGAGCCATGATTTAGATAAAGAAAAGGGAAAAAATTCAATTAATGGAAGCTCCCAGGATCAAAAGGTGGATGAAATGCAAGAGGATGAGAAGCAAGAAAATTTGCAGAACTAG 1761 0.4384 MPEKSRKVPFTEQDSAKLLERYDATTVLTLLQELAHYPHAKIDWNELVKNTSTGISTAREYQMVWRHLAYRHALAENLEDGAEPLDDDSDLECELEVSPPVSAESVSEAAACVKVMVASRTLSESTPSSSTIEAPLTITVPVCHSSKTPSESSHSSNLMQGTNAIFPVTVQRQTLPTAPSTDGIEAKGLGGGNMASKRKRKAWSEEEDIQLRAAVQRFGEGNWANMAKGDNFPIKRSPTQLAQRWSILRKKDGTVNSGSVVTSTTYTTAEQLATRHSLSLALDMPFKKLTALGTTDQAKTSLNSSKIQVQRNATTTTTQSSLEPPHKQSILKGNPISNPGLKATAVAVGARIVSPSNMTSQLKVAQARNAVPATNISLAKPSTSTGLSSESEVQAHTGSSVSHVLPQSGRVPSQSSPAPSQSIAAITSPPSSSSTVKAASSTVSEKDKLVTPLVNKVPIKQEANTTDELRDSKPSPAPKETTSYELRDSKPSPTLKETVQNDEKLSQDKSMNIPVKESVPSIVASKGKEEVDDKGVPKKQVKSEDQGNNGSHDLDKEKGKNSINGSSQDQKVDEMQEDEKQENLQN 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151369g00003 586 CDD SANT_TRF 201 250 - -
Stsc151369g00003 586 MobiDBLite consensus disorder prediction 381 448 - -
Stsc151369g00003 586 MobiDBLite consensus disorder prediction 299 335 - -
Stsc151369g00003 586 ProSiteProfiles Myb-like domain profile. 195 249 IPR001005 -
Stsc151369g00003 586 Gene3D - 193 254 - -
Stsc151369g00003 586 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 3 580 - -
Stsc151369g00003 586 MobiDBLite consensus disorder prediction 526 562 - -
Stsc151369g00003 586 Pfam Myb-like DNA-binding domain 200 245 IPR001005 -
Stsc151369g00003 586 SMART sant 199 251 IPR001005 -
Stsc151369g00003 586 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 195 253 IPR017930 -
Stsc151369g00003 586 MobiDBLite consensus disorder prediction 177 201 - -
Stsc151369g00003 586 SUPERFAMILY Homeodomain-like 198 251 IPR009057 -
Stsc151369g00003 586 MobiDBLite consensus disorder prediction 299 338 - -
Stsc151369g00003 586 MobiDBLite consensus disorder prediction 381 586 - -
Stsc151369g00003 586 MobiDBLite consensus disorder prediction 493 514 - -
Stsc151369g00003 586 MobiDBLite consensus disorder prediction 571 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151369g00003 Stsc-Chr151369 18440 23348 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc151369g00003 Myb_DNA-binding 2.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151369g00003 - - adu:107460964 791.571