Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151364g00001 ATGTTCAGCTTTCTTGTTGCTGCAAAATTGTATGCAAGCGAGCCTCCTCCTCTAACGCTTGATTACTATAAATCCACTTGTCCCACTGTGTTTGATGTTATAAGGAAGGAAACAGAATGTGCAGTGCTCACTGATCCGCGCAATGCGGCATTGATAGTCCGGCTGCACTTCCATGATTGCTTTGTTCAGGGATGCGATGCATCAATTTTGCTTGATGACACGGTTACACTCAAAGGTGAAAAGACAGCAGCTGCCAACGCCCACTCTTTGAAAGGATTCGAATTAATTGATCAAATCAAGAACATGGTGGAATCCGAGTGCCCCGGAATTGTCTCTTGTGCTGATATTCTTACAATTGCAGCTAGAGATGCTGTGATTCTGGTAGGTGGGCCATATTGGGATGTTCCAGTGGGAAGGAAGGATTCTATGACTGCAAATATTGATCTTGCAAACACCAATCTTCCCACTCCAAATGAAAGCCTTCTCTCCATCATTTCCAAGTTTCTTTATCAAGGCCTCTCTGTTACAGATATGGTAGCCCTTTCAGGAGCTCACACCATTGGCATGGCAAGATGTCAAAGCTTCAGATCAAGAATTTATGGGGACTACGGATTCACTTCAGTTAAGAATCCAATTTCAGAGAGCCAACTCAGCAACTTGAGATCTATATGTCCACCAATTGGAGGAGGAAAATCAGACAATAACATATCAGCAATGGACTATGTTACCCCTAACCTGTTTGACAACTCTTTCTACCAATTGCTTCTAAATGGTGAAGGACTTCTCAACTCAGATCAAGAAATGTACTCAAGTGTGTTTGGAATCCAAACAAGGGAGCTTGTTAAGAAGTACGCGGCGGACCCTCTTGATTTTTTCAGGCAATTTTCTGAATCCATGGTGAAGATGGGAAACATTACAAACTCCGAGAGCTTCGTAACGGGAGAAGTTAGGAAGAACTGTAGATTTGTCAATACATGA 978 0.4274 MFSFLVAAKLYASEPPPLTLDYYKSTCPTVFDVIRKETECAVLTDPRNAALIVRLHFHDCFVQGCDASILLDDTVTLKGEKTAAANAHSLKGFELIDQIKNMVESECPGIVSCADILTIAARDAVILVGGPYWDVPVGRKDSMTANIDLANTNLPTPNESLLSIISKFLYQGLSVTDMVALSGAHTIGMARCQSFRSRIYGDYGFTSVKNPISESQLSNLRSICPPIGGGKSDNNISAMDYVTPNLFDNSFYQLLLNGEGLLNSDQEMYSSVFGIQTRELVKKYAADPLDFFRQFSESMVKMGNITNSESFVTGEVRKNCRFVNT 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151364g00001 325 Gene3D - 22 324 - -
Stsc151364g00001 325 CDD secretory_peroxidase 18 323 IPR033905 GO:0004601|GO:0042744
Stsc151364g00001 325 PANTHER PEROXIDASE 72-RELATED 18 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151364g00001 325 Pfam Peroxidase 35 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151364g00001 325 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151364g00001 325 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151364g00001 325 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151364g00001 325 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151364g00001 325 PRINTS Haem peroxidase superfamily signature 49 63 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151364g00001 325 Gene3D Peroxidase, domain 2 155 302 - -
Stsc151364g00001 325 ProSitePatterns Peroxidases active site signature. 49 60 IPR019794 GO:0004601
Stsc151364g00001 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Stsc151364g00001 325 FunFam Peroxidase 21 161 - -
Stsc151364g00001 325 SUPERFAMILY Heme-dependent peroxidases 18 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc151364g00001 325 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151364g00001 325 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151364g00001 325 PRINTS Plant peroxidase signature 27 46 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151364g00001 325 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151364g00001 325 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151364g00001 325 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151364g00001 325 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151364g00001 325 PRINTS Plant peroxidase signature 51 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151364g00001 325 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151364g00001 325 ProSiteProfiles Plant heme peroxidase family profile. 17 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151364g00001 325 FunFam Peroxidase 155 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151364g00001 Stsc-Chr151364 476 4663 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151364g00001 17 325 Peroxidase AT1G68850 72.168 1.69e-172 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151364g00001 K00430 - gmx:100783236 558.525