Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151357g00012 ATGGGGATGGCTGCTACAGAGTCACAACAGTTTCATGTGTTGGCTGTTGATGACAGCCTCATAGATAGGAAACTTATTGAGAGGCTCCTCAGAACCTCTTCTTACCAAGTTACTACAGTTGATTCCGGGACCAAAGCTTTAGAATTTCTGGGCTTGCGTGAGAATCATGATGGCACCCCAAATACACCATCTGTTTCTCCTAACAATCATCAGGAGGTGGAGGTGAATATGGTTATAACAGATTACTGTATGCCTGGGATGACTGGCTATGATTTGCTCAAGAAAATCAAGGAATCTTCATCTCTTAGAAACATACCAGTGGTGATTATGTCTTCTGAGAATGTGCCTTCAAGAATTAGCAGATGCTTGGAGGAAGGAGCTGAAGAGTTTTTCTTGAAGCCAGTGAGGCTTTCAGATTTGAATAGGCTCAAACCACATATAATGAAGAGGAGCAAGTTGAAAGATGAAGATCAAAAGCAACAAGTGATACCAGAAAAGATTGAGAACTTGTTAGAAGTTCAAAAGCAGCATCAACCACAAGAAGAAGCACAGCCACAACCACCATTAGAGCAACAGCAACAAAACAATAACAACAGCAACAAGAGGAAGAGCATGGAGCAGAGCCTTTCACCAGAGCCAACTGACAGAACTAGACCAAGATACAGTGGCATAGCCACTGTGGTATGA 687 0.425 MGMAATESQQFHVLAVDDSLIDRKLIERLLRTSSYQVTTVDSGTKALEFLGLRENHDGTPNTPSVSPNNHQEVEVNMVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNRLKPHIMKRSKLKDEDQKQQVIPEKIENLLEVQKQHQPQEEAQPQPPLEQQQQNNNNSNKRKSMEQSLSPEPTDRTRPRYSGIATVV 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151357g00012 228 Gene3D - 12 217 - -
Stsc151357g00012 228 MobiDBLite consensus disorder prediction 174 215 - -
Stsc151357g00012 228 CDD REC_typeA_ARR 13 143 - -
Stsc151357g00012 228 SUPERFAMILY CheY-like 10 172 IPR011006 -
Stsc151357g00012 228 MobiDBLite consensus disorder prediction 174 228 - -
Stsc151357g00012 228 Pfam Response regulator receiver domain 13 140 IPR001789 GO:0000160
Stsc151357g00012 228 ProSiteProfiles Response regulatory domain profile. 12 148 IPR001789 GO:0000160
Stsc151357g00012 228 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 193 IPR045279 GO:0009736
Stsc151357g00012 228 SMART REC_2 11 147 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151357g00012 Stsc-Chr151357 43049 45115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151357g00012 1 228 Response Regulator Gene Family AT3G57040 61.667 1.58e-93 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc151357g00012 Response_reg 1.4e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151357g00012 K14492 - gmx:100788079 298.13