Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151354g00003 ATGTTCGCTGAAGAGAATGGCCTCAAGGGAGACCCAAGGCTTCAAGCCATTTCTCAAGCCATCAGAGTCGTTCCCAACTTCCCCAAACAAGGAATAATGTTTCAGGACATAACGACATTGTTGTTGGATCACAAGGCCTTCAAGGACACGGTCGACATTTTTGTCGATCGTTATAGAGACATGCACATTTCAGTTGTTGCCGGAGTGGAAGCAAGGGGATTCTTGTTTGGTCCCTCAATTGCATTAGGGATCGGTGCAAAGTTCGTTCCGTTACGCAAACCACGAAAGCTGCCAGGTGAAGTAATATCAGAAAAGTATTCTCTAGAATACGGAAATGATTGTTTGGAGTTACATGTTGGTGCTGTCCAGCCGGGCGAACGTGCCATAGTTATCGATGACTTGGTGGCAACAGGTGGAACTCTCTCCGCAGCAATAAGACTTCTAGAACGTTCTGGTGCTGAAGTAGTGGAATGTGCTTGTGTGATTGGTGTGCCAGATGTTAAGGGACACTGTAGGCTTATCGGAAAGCCACTCTACGTCCTCGTGGAGCCACGTCAAGTAGATAAATGTTCCAGATGTGAAGTTGATTCTTCATTTGGCTGA 603 0.4643 MFAEENGLKGDPRLQAISQAIRVVPNFPKQGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMHISVVAGVEARGFLFGPSIALGIGAKFVPLRKPRKLPGEVISEKYSLEYGNDCLELHVGAVQPGERAIVIDDLVATGGTLSAAIRLLERSGAEVVECACVIGVPDVKGHCRLIGKPLYVLVEPRQVDKCSRCEVDSSFG 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151354g00003 200 Pfam Phosphoribosyl transferase domain 43 166 IPR000836 -
Stsc151354g00003 200 CDD PRTases_typeI 51 183 IPR000836 -
Stsc151354g00003 200 NCBIfam adenine phosphoribosyltransferase 18 182 IPR005764 GO:0003999|GO:0005737|GO:0006168
Stsc151354g00003 200 FunFam Adenine phosphoribosyltransferase 1 5 184 - -
Stsc151354g00003 200 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 185 - -
Stsc151354g00003 200 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Stsc151354g00003 200 Gene3D - 6 184 IPR029057 -
Stsc151354g00003 200 SUPERFAMILY PRTase-like 20 176 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151354g00003 Stsc-Chr151354 36007 40447 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151354g00003 11 183 PRT Gene Family AT1G27450 71.676 6.94e-91 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151354g00003 K00759 - gmx:100499904 356.681