Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151345g00007 ATGTGTTCATCGCTGAAGGGGCAATACGAGATAAGCGAAGAGATAGGCAGAGGTCGTTTCGGCACAATATACCGGTGCTACGACGTCGTTTCTGGAAATCCATACGCCTGCAAAATAATCGATAAATCACTCCTAACAGATGAAACAGACCAACAGTGTATTCTGAACGAACCAAAGCTGATGACACTCCTAACCCCTCACCCTAACATCCTCACAATCCATAACGCGTTTGAAGACCAACACTCTCTCTCTCTCATCCTCGACCTTTGCCTTCCCCTCACCCTCCTCGACCGTCTAACTGCCTCAACCGTCACCCCATTCCCCAACGCCTGCCACGTCATCACCCAGCTTCTTCAGGCCGTTTCTCACTGCCACCGCTCCGGGATCGCGCATCGGGACTTGAAGCCCGACAATATTCTCTTTGATTCCCGGGACGTCTTGAAGCTCGCCGACTTTGGCTCCGCCGAGTGGTTCGGCGGAGACGGCGGGAGCCTCATGACGGGTGTGGTCGGGACGCCGTATTACGTGGCGCCGGAGGTGTTGATGGGGAGGGAGTATGATGAGAAGGTTGATGTCTGGAGCTGTGGAGTCATACTTTACATGATGCTGGCCGGTGCGCCGCCGTTTTACGGCGAGTCTGCCGTCGAGATATTCGAGTCTGTTCTCCGGGCGAACTTGAGGTTTCCGTCCAGGGTTTTCCGGAATGTGTCGCCCGCCGCCAAGGATTTGTTGAGGAAGATGATATGTAAGGACCCTTCTCGGAGGATCTCCGCCGAACAAGCCTTGAGGCACCCATGGATCTTGAGTGGAGGTGAGAGTGAGACAGCTGAACTAACTTGA 840 0.5429 MCSSLKGQYEISEEIGRGRFGTIYRCYDVVSGNPYACKIIDKSLLTDETDQQCILNEPKLMTLLTPHPNILTIHNAFEDQHSLSLILDLCLPLTLLDRLTASTVTPFPNACHVITQLLQAVSHCHRSGIAHRDLKPDNILFDSRDVLKLADFGSAEWFGGDGGSLMTGVVGTPYYVAPEVLMGREYDEKVDVWSCGVILYMMLAGAPPFYGESAVEIFESVLRANLRFPSRVFRNVSPAAKDLLRKMICKDPSRRISAEQALRHPWILSGGESETAELT 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151345g00007 279 Gene3D Transferase(Phosphotransferase) domain 1 2 278 - -
Stsc151345g00007 279 ProSiteProfiles Protein kinase domain profile. 9 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151345g00007 279 SMART serkin_6 9 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151345g00007 279 PIRSF ILK 3 263 - -
Stsc151345g00007 279 SUPERFAMILY Protein kinase-like (PK-like) 6 269 IPR011009 -
Stsc151345g00007 279 CDD STKc_CAMK 8 266 - -
Stsc151345g00007 279 PANTHER SERINE/THREONINE-PROTEIN KINASE 4 270 - -
Stsc151345g00007 279 FunFam Maternal embryonic leucine zipper kinase 2 275 - -
Stsc151345g00007 279 Pfam Protein kinase domain 9 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151345g00007 279 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Stsc151345g00007 279 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151345g00007 Stsc-Chr151345 40854 42695 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151345g00007 9 273 EF-hand Containing Proteins AT4G04720 42.164 7.76e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Stsc151345g00007 Pkinase 1.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151345g00007 - K08794 gmx:548089 392.119