Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151344g00011 ATGACAACGGGTCCTGATGCTTATGACGAAACAGAACAAACAGACGAGTTTTTGTGTGATGTCGAGGAGGAGTATATTCCGAAGGTTGGAATGACATTTCAAGCAGTTGCTGAAGTTGGTTTGTTGTATAAAGAGTATGCCAAACGTGCAGGGTTTTCTACTAAAATAAGAAACTCAAATAGATGTAAGGAGACAAAGGAAGTTATTAATCAACTCATAACATGTAACAGAGAAGGGAAATGGACTTCCGAAGCACCTTCTGTTGAGAAGACGAATCCTACCTGTGGTGCAAACTGTCCTACACGAATTTATGCTCATGCAATAAAGATGACTCGAATGTGGCACATTTCAAAAGTAGTTCTTCATCATTCACATCCATGCTTCCCAAAGCAAGCTCAGATGTTATCATAA 411 0.3942 MTTGPDAYDETEQTDEFLCDVEEEYIPKVGMTFQAVAEVGLLYKEYAKRAGFSTKIRNSNRCKETKEVINQLITCNREGKWTSEAPSVEKTNPTCGANCPTRIYAHAIKMTRMWHISKVVLHHSHPCFPKQAQMLS 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151344g00011 136 Pfam FAR1 DNA-binding domain 42 129 IPR004330 -
Stsc151344g00011 136 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151344g00011 Stsc-Chr151344 47217 47814 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc151344g00011 FAR1 4.1e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151344g00011 - - aip:110271906 147.517