Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151344g00008 ATGGATGTGAATAGGACAATATTGGTGTGCCAAAATCCACACAGCTATGGTTACAAGGATGTTTGGCACTTAGGCAACCCTCTAGATTCCCCAACTTCTCTTCTGTTTGTGCAGCTTTCTTTGATCACCATGCTTTCTCAGTGCATTGAGGTTTGTCTCAAGCCATTAGGACAATCCTCCCTTGTTTCACAGATTCTTGGTGGAGTGATATTTGGGCCATCAGTATTGGGACAAAAGAAGTCACTGGCAAATGCTTTGTTCCCAATGAAAGGTGCAATGGTGCTTGAAACACTTGCATCTTTTGGCCTAATGTTCTTCTTCTTCATAGTAACCGTCAAGATGGACCTTGCCACAATGCTAAGAACAGAGAAACAAGCCATATCCATTGGTCTCTCCACATTCTTAATCACCTTGGTAATCTCAGGTGGATTGTCATTTGTATTAAAGAAGTATGTTTCCATGGACAAAAGCCTCTCAGAAGCTCTCCCAGTCATAGCCATGTCACAAGCCATGACAGTGTTCATAGTTGTGTCTGTCCTCTTGACAGAGCTCAAGATCCTTAACACGGACATCGGCCGTCTAGCCATGTCCTCTGCGATGTCTGCAGACATTGGTAGCTTCTCCTTGATAGTTATCATCTTTGCGAAACTGGAGAACAAGGGTGGCAACATTGTGTCCTTGGTTTGGATAATTCTGTCCATTGCAGCATTGATTGTTCTTATAATTTATGTGATGAGGCCTGCTGTTATATGGATGCTAAAGCGATCCGAAGGGAAGCCGGTCGACGAATTCTACATAGTTTGTATCTTGATCTTTGTCTTGATGGCCGGATTCCTCAGTGAGCTTATTGGACAACATTTTGTTATGGGGCCGATACTCTTAGGCTTGGCAATCCCGGAAGGGCCGCCGATGGGGACCGCTTTGATGGCGAAAATGGAGACTATATGTCATGGATTCTTTTATCCAATCTACCTTGCTGTTAGTGGACTGAAAACTAATGTGTTCAGGATCAGCTTCAGGTCCTTTTGGGTTGTTGGTGTTGTGGTGTTTGTGTCTTCCATTGCAAAGATTGGTGCTGTTATGTTGCCAGGGTATTATAGTAATAACATGTCCATGAAAGAATGTTGTATGATTGGCCTCATTCTGAATGCTAGAGGCATAGCAGAACTTACCCTTTACAATATGTGGAAGGGTAGCAAGTTACTAACGGAGCAAGAGTTCTCTTTGATGGTGGTATCAATTTTGCTTGTAAATGCTATCATATCTCCACTTCTAAAGATGTTATATGATCCTTCAGAACAATACCATTCCATAGGAAGATGCACAATTCTGCACACAAGGCGGGATTCGGAGCTTCGGGTCATGATCTGCATTCACAACAACGAAAACATCCCTACACTGATGAACATTATAGAAGCATCTTATGCAAGCAGAGAAAGCATGGTTGGAGTCATAGCATTAATCTTAGTAGAGCTTCTTGGAAGAGCAAGGCCTCTTCTTGTTGCTCACCAAGAACATGATACATTGAGGTCAGAACCATGCAGCTCAACTCAAATAGAGAATGCATTGAAGCAATATGCACAGCAGAACGAAGGATATGCATCAGTTCAATCCTTCTCATCCACCTCCAACTTCGAAACAATGCACGACGATGTCTGTAGAATAGCACTTGACAAAAGAGCCAACATTCTAATCATGCCGTTCCACAAGCGTTGGGAGATTGACGGTACAGTTCAAGTCATGAACAGAGCAATGCAGATCATGAACGCCCGAGTCCTCGAAAAAGCCCCGTGCTCCGTGGGAATCCTCGTCGACCGGGGAATCCTGTGCGGATCCTCATCACTCTTAGTCTCTAGAACAACATACCACGTAGCAGTATTCTTCATAGGTGGCGCTGATGATGCTGAGGCTCTTGCTTACAGCTCAAGAATGGCCCGGCACGAGATAGTCCACGTGACGCTCGTCCGGTTTCTCCTCTTCGGAGAGGAGAATTCGAAGGAGAGGAAGCGCGACAGCGACCTTGTGGACGAGTACAGATACTATAACGCCGGGAACCGGCACTTTGAGGTGATGGATGAAGTGGTTAAAGATGGCATAGAGATGAGTTGTTGCATAAGGAGGATAATTGACTATTTTGACCTTGTGATGGTGGGAAGAGAACACCCTGAATGTGTTCTGCTTCAAGGGCATGATCAGTGGAGTGAGTGTCCTGAGTTAGGGACAATTGGGGACATGCTGGCATCACAGGATTTTGTGACAAAGGCTTCGTTGCTTGTGGTGCAACAACAGAGGGTAAGAGGGAGGGTTGTTAATAAGAACACTACTACTAATAATAATAATCCTTTCCCAATTCAAAAGGATCAGATGATGATGGTTAATGATGTTGTTCTTCTTCCTCATGATGAGCTTAATAGAGCTTCTTGTTCTATTTCAGTAGTGGATAGATGA 2448 0.4416 MDVNRTILVCQNPHSYGYKDVWHLGNPLDSPTSLLFVQLSLITMLSQCIEVCLKPLGQSSLVSQILGGVIFGPSVLGQKKSLANALFPMKGAMVLETLASFGLMFFFFIVTVKMDLATMLRTEKQAISIGLSTFLITLVISGGLSFVLKKYVSMDKSLSEALPVIAMSQAMTVFIVVSVLLTELKILNTDIGRLAMSSAMSADIGSFSLIVIIFAKLENKGGNIVSLVWIILSIAALIVLIIYVMRPAVIWMLKRSEGKPVDEFYIVCILIFVLMAGFLSELIGQHFVMGPILLGLAIPEGPPMGTALMAKMETICHGFFYPIYLAVSGLKTNVFRISFRSFWVVGVVVFVSSIAKIGAVMLPGYYSNNMSMKECCMIGLILNARGIAELTLYNMWKGSKLLTEQEFSLMVVSILLVNAIISPLLKMLYDPSEQYHSIGRCTILHTRRDSELRVMICIHNNENIPTLMNIIEASYASRESMVGVIALILVELLGRARPLLVAHQEHDTLRSEPCSSTQIENALKQYAQQNEGYASVQSFSSTSNFETMHDDVCRIALDKRANILIMPFHKRWEIDGTVQVMNRAMQIMNARVLEKAPCSVGILVDRGILCGSSSLLVSRTTYHVAVFFIGGADDAEALAYSSRMARHEIVHVTLVRFLLFGEENSKERKRDSDLVDEYRYYNAGNRHFEVMDEVVKDGIEMSCCIRRIIDYFDLVMVGREHPECVLLQGHDQWSECPELGTIGDMLASQDFVTKASLLVVQQQRVRGRVVNKNTTTNNNNPFPIQKDQMMMVNDVVLLPHDELNRASCSISVVDR 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151344g00008 815 PANTHER CATION/H + ANTIPORTER 10 764 - -
Stsc151344g00008 815 Gene3D - 33 437 IPR038770 -
Stsc151344g00008 815 Pfam Sodium/hydrogen exchanger family 41 425 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151344g00008 Stsc-Chr151344 37481 41029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151344g00008 8 762 Antiporter Super Family AT2G13620 35.842 1.11e-170 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151344g00008 K26731 - gmx:100779700 1037.71