Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151343g00006 ATGAAGCCAAAGTTTCTGAGAGGGTACCTTAACAAGTGGAAGAAACTGGTGGGTAGAGGAGCCACCAAACCTCCTTGTGCTGCCTATGAATACTGCTGTGAATGGTTTCTGTGGCCTTCCAAGCATGAAAGAAGCTCCATTCCAAGTGATGTCCCAAAGGGACACTTGGTTGTGTATGTAGGAGAGAATCACAAGAGATATGTGATCAAGGTTACACTCCTCAACCATCCACTCTTCAAGGCCTTGCTTGATCAAGCTCAGGAAGAATACGATTTCGTCGCGGATTCAAAACTATGTATTCCTTGTGAAGATCACTTCTTCTTAAGTGTCCTTCGACGCGCAAGCTCGCCCGAGAAGGAAACGGTGTATGTGCGGCCCTGA 381 0.4698 MKPKFLRGYLNKWKKLVGRGATKPPCAAYEYCCEWFLWPSKHERSSIPSDVPKGHLVVYVGENHKRYVIKVTLLNHPLFKALLDQAQEEYDFVADSKLCIPCEDHFFLSVLRRASSPEKETVYVRP 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151343g00006 126 Pfam Auxin responsive protein 42 112 IPR003676 GO:0009733
Stsc151343g00006 126 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 42 109 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151343g00006 Stsc-Chr151343 41669 42165 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151343g00006 49 111 Calmodulin-binding Proteins AT4G34750 49.206 1.68e-18 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151343g00006 K14488 - gmx:100793017 182.57