Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151340g00005 ATGTCGAATATTACTGTTTGTGCTCGCTTCAGGCCTTTAAATTCAAAAGAGAAGCTAAATGGCGATGCTGATTCTGTCTGCATTCGGTGCATAGACTCGGAAACTTTCGTTTTCAAGGATGACAAGGATGAAGAATTGACGTTTAGCTTTGATAGAGTGTTCTACGAGGAATCTAAGCAAGATGATGTCTATCAATTCATAGCTCTTCCCATAGTTAGAGATGCTGTCAATGCAATTAACGGGACAATTATCACTTATGGCCAGACTGGAGCTGGGAAGACATATAGTATGGAGGGACCTGGTATACTTGAATGCGATGAACAGAAGCAGGGACTGCTTCCAAGGGTTGTAAAAGGACTATTTGATTCCTTAAGTCCTTCAGATGAAGAAGTGACATTTTCAATCAAATTGTCAATGGTACCATGA 426 0.4038 MSNITVCARFRPLNSKEKLNGDADSVCIRCIDSETFVFKDDKDEELTFSFDRVFYEESKQDDVYQFIALPIVRDAVNAINGTIITYGQTGAGKTYSMEGPGILECDEQKQGLLPRVVKGLFDSLSPSDEEVTFSIKLSMVP 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151340g00005 141 SMART kinesin_4 1 140 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151340g00005 141 PANTHER CENTROMERE PROTEIN E 2 138 IPR027640 GO:0003777|GO:0007018
Stsc151340g00005 141 ProSiteProfiles Kinesin motor domain profile. 3 141 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151340g00005 141 Pfam Kinesin motor domain 9 140 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151340g00005 141 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 140 IPR027417 -
Stsc151340g00005 141 Gene3D Kinesin motor domain 1 141 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151340g00005 Stsc-Chr151340 28224 29447 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151340g00005 4 140 Calmodulin-binding Proteins AT5G65930 35.971 1.24e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151340g00005 - - gmx:100786737 223.787