Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151337g00010 AGGGATATCAAGCCAGACAACTTATTACTTGATAGATATGGACACTTGAAACTGTCCGATTTTGGACTTTGTAAACCATTAGATTGTAGTACAATTGCCGAAGGGGATTTTTCTGTGGGTCAGAATGTGAATGGATCTACACAAAATGATGAACGTGTTATTTCAAAACGCACACAACGAGAACAATTACAACACTGGCAACAGAACAGGAGGACACTTGCCTATTCAACTGTTGGTACACCAGATTATATTGCTCCTGAAGTTTTATTGAAGAAAGGTTATGGGATGGAATGTGATTGGTGGTCACTTGGAGCTATTATGTATGAGATGCTGGTAGGATATCCACCATTTTATTCTGATGATCCAATGACGACATGTAGGAAGATAGTAAATTGGAGATCTCACTTGAAATTTCCTGAAGAAGCAAGGCTATCCCGAGAGGCTAAAGATCTTATTTGTAAACTTCTGTGCAATGTGAACCACAGGCTGGGGTCTAAAGGTGCAGATGAAATAAAGCTGTATCAAATGGAAGCTGCATTTATTCCAGAAGTAAATAATGAGCTAGATACTCAAAACTTTGAGAAGTTTGAAGAGTCAGACATCCAAGCTCAATCATCATCAAGACACGGCCCGTGGAGGAAGATGCTTTCATCTAAGGACTTGAATTTTGTTGGATACACATACAAGAACTTTGAAATTGTCAATGACTATCAAGTTCCTGGGATGGCTGAATTAAAGAGGAAACAATCCAAATCAAATAGGCCATCCATTAAGTCACTTTTTGAGTCTGATTCAGAGATATCAGAACTATCTGAAGTTCCTGAAACATCTTCAACCAATCAATCTTCTCAAGGAAGCTTTATGAAGCTCTTGCCACCCCAATTAGAGGTATCTAACAGGGAGAAGAGGCTTCCTCCTAGGTCATAA 927 0.3905 RDIKPDNLLLDRYGHLKLSDFGLCKPLDCSTIAEGDFSVGQNVNGSTQNDERVISKRTQREQLQHWQQNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMTTCRKIVNWRSHLKFPEEARLSREAKDLICKLLCNVNHRLGSKGADEIKLYQMEAAFIPEVNNELDTQNFEKFEESDIQAQSSSRHGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMAELKRKQSKSNRPSIKSLFESDSEISELSEVPETSSTNQSSQGSFMKLLPPQLEVSNREKRLPPRS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151337g00010 308 FunFam Probable serine/threonine-protein kinase cot-1 1 188 - -
Stsc151337g00010 308 Pfam Protein kinase domain 1 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151337g00010 308 MobiDBLite consensus disorder prediction 246 308 - -
Stsc151337g00010 308 Pfam Protein kinase C terminal domain 184 228 IPR017892 GO:0004674|GO:0005524|GO:0006468
Stsc151337g00010 308 ProSiteProfiles Protein kinase domain profile. 1 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151337g00010 308 SMART pkinase_C_6 166 230 IPR000961 GO:0004674|GO:0005524|GO:0006468
Stsc151337g00010 308 MobiDBLite consensus disorder prediction 254 289 - -
Stsc151337g00010 308 PANTHER MYOTONIC DYSTROPHY S/T KINASE-RELATED 1 269 - -
Stsc151337g00010 308 Gene3D Transferase(Phosphotransferase) domain 1 1 194 - -
Stsc151337g00010 308 ProSiteProfiles AGC-kinase C-terminal domain profile. 166 238 IPR000961 GO:0004674|GO:0005524|GO:0006468
Stsc151337g00010 308 SMART serkin_6 1 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151337g00010 308 SUPERFAMILY Protein kinase-like (PK-like) 1 218 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151337g00010 Stsc-Chr151337 52860 57003 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151337g00010 1 296 AGC Kinase Gene Family AT4G14350 71.197 2.48e-161 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Stsc151337g00010 Pkinase 6.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151337g00010 K08790 - qsa:O6P43_006882 518.079