Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151337g00008 ATGATGAAAGTTGGGTTTGAGGTAGTTCATGGAAATTCAAACATGATCAACCGTTCCTCTATGCATGAAACTTGGGACTATCCAAATCTTGTTTCTTTGCCACCTCCAATCCCATCAATCCAATTTCCACTAAAGCCCTCACCAAATGAAATCCAACAAAATGAGACATGTGATTGGGTTGACAACATTGCCAAGCACCTTAATGTGAATGTTGATGAAGACTTACCACATCAACAAACCACCAATGATGATAATAATAACTTCTTATTATTGTCAAATAATAATAACCCTTCATCAAGTCACCACCCCAACTTCAATCCAATAAGAAAAACCACTTTTTGGAAAACCCCATTTGATCCTTGCACCAATATTGACCCTCCTACCACCAATAGCTTTGATCTTCATCAAATTCAATCAAACACCTCAAATTTGGACCATAATATTATTATTAACAACAATCATAGTAGTTGTACTACTACTAATAATAATAACAACAATATCCATGATCAAAGTTTGAATTTGATTACCCTTCTAATGGAGTGTGCTGTGGCAATCTCTGTGGACAACCTTGTTGATGCTCAAAGGATGTTGTTGGAGCTAACACAATTGGCCTCACCTTATAAGGCATCATGTGCTGAAAGAGTTGTTGCATATTTTGCAAAAGCCATGAATAGTAGGGTCATGAATTCTTTTCTTGGTGTATGTTCACCTTTGATTATTGATCACAAGAGCATCCATTCATCATTCCAAGTTTTCAACAATGTTTCCCCATTCATCAAATTTGCACATTTCACTTCCAACCAAGCAATCCTTGAAGCAGTGAATAGGTGCCAATGCATACACATCATTGATTTGGACATCATGCAAGGCCTTCAATGGCCAGCATTCTTCCACATTCTTGCCACAAGATATGAGGGCCCACCCGAGGTGACAATGACCGGTATCGGTGCATCCATGGACCTCCTGGTCAAGACAGGGAAACAACTCTCGAATTTCGCCAGACGGCTTGGAATGTCTTTGAGATTCCACCCTGTCGTCGCGAAATTCGGGGAAATTGATGCATCCATGGTGCAAATTAGGCCTTGTGAGACGGTCGCGGTTCACTGGTTACAACATTCAATGTACGATTCGACCGGACCGGATTTGAAAACCCTAAGGCTAATCAAGGAATTGGAGCCAAGAATCATCACATTAGTGGAGCAAGATGTGAACAACAATGGAGGATCATTCTTGGATAGGTTTGTTGGATCATTGCACTACTACTCAACACTATTTGATTCCCTTGGTGTATACTTGGAAATTGATGATCCAAATAGGCACAATGTTGAGCATGGAGTGTTCTCTAGGGAGATCAACAACATATTGGCCATAGGTGGACCTTCAAGGAGTGGTGAGGAAAAGTTTGTTAGGCAATGGAGGAGTGAACTCATTTCAAGGAGCAATTGGTTTGTTCAAGTTCCAATGAGTGCTAATTCAATGGCTCAAGCACAATTGATACTTAACATGTTCTCACCAGCTCATGGTTATAGCCTTGCTCAAGTTGATGGCACTTTGAGGCTTGGTTGGAAGGATACTAGCTTGTACACTGCTTCTGCATGGACTTGTAATTTTAATCATAATGCTTTTAGCTAG 1632 0.4032 MMKVGFEVVHGNSNMINRSSMHETWDYPNLVSLPPPIPSIQFPLKPSPNEIQQNETCDWVDNIAKHLNVNVDEDLPHQQTTNDDNNNFLLLSNNNNPSSSHHPNFNPIRKTTFWKTPFDPCTNIDPPTTNSFDLHQIQSNTSNLDHNIIINNNHSSCTTTNNNNNNIHDQSLNLITLLMECAVAISVDNLVDAQRMLLELTQLASPYKASCAERVVAYFAKAMNSRVMNSFLGVCSPLIIDHKSIHSSFQVFNNVSPFIKFAHFTSNQAILEAVNRCQCIHIIDLDIMQGLQWPAFFHILATRYEGPPEVTMTGIGASMDLLVKTGKQLSNFARRLGMSLRFHPVVAKFGEIDASMVQIRPCETVAVHWLQHSMYDSTGPDLKTLRLIKELEPRIITLVEQDVNNNGGSFLDRFVGSLHYYSTLFDSLGVYLEIDDPNRHNVEHGVFSREINNILAIGGPSRSGEEKFVRQWRSELISRSNWFVQVPMSANSMAQAQLILNMFSPAHGYSLAQVDGTLRLGWKDTSLYTASAWTCNFNHNAFS 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151337g00008 543 MobiDBLite consensus disorder prediction 75 104 - -
Stsc151337g00008 543 Pfam GRAS domain family 174 534 IPR005202 -
Stsc151337g00008 543 ProSiteProfiles GRAS family profile. 165 534 IPR005202 -
Stsc151337g00008 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 152 530 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151337g00008 Stsc-Chr151337 38616 40247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151337g00008 180 534 GRAS Transcription Factor Family AT3G54220 51.801 1.23e-124 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc151337g00008 GRAS 1.3e-102 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151337g00008 - - gmx:100775656 654.055