Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151335g00007 ATGTATTCATCACCAAATAGTAGTAATACTATTCCCTTCATCAATGGAAACAACCATGACCACCAAATCTTCCCCTACCCTTCTTCTTCTTCTTCTTCTTCTAATGTTATTAGGCCTTTTTCAATTGAAAGCAACCCTTCCTCCTCTTCTTCAAAACAAGAACAAGCCAACAATAATTGTCCTTCAAGCCCTTCTTTTTCTTTCTTTCAATTCCCTTACTCTCCATTGTTTGAAGACAATGAGATTTTCCTTAACGGTGAATTTCATTTTCTCTATCATCACCACCACCAAAACCAGCACCAGTCTCTGACCCGGCCTGACCGTGACAACGATGAGGCCGGTGCAGCAAACATGGAGGTAGTCTCAGTCTCGAATGCAATAAAGAACAACAACACTACTACTCAAGGCATGATCGTTTCCGCCGCCACCGTCGCCACCACCACCCCGGTGGCGGCTACAACCACCGCTGCTGCTACTAAGACTACTCCAACAAGAAGAAGATCAAGCAAGAGAGATCGGCACAGCAAGATCAACACTGCAAGGGGATTAAGGGACAGAAGAATGAGATTGTCCCTGGAAATCAAGCAGCTTGCAAGGGAGAAGAAGAAGAATCACCATCACCATCACCAAAGTTGTAGCAGCGAATTCAATAATGGCGGCAAGAGTGCCTCTTCGACTTCTGAATGCGAAGGGGTTTCAAGCTTGGACGAAGTTGCAATAAGCCAAAGTCAATTACAAGAAGAGAAGCTGTTACCACCGTCGCCGCCGCCGCTGCCAACGAGGACGAGGAAGCGAAGGGGGAGTAACAAAGCTTCAAGGAAAAGCGCGTTCAATCAAATTGGTAAAGAATCGAGGGAAAAGGCAAGGGAAAGGGCAAGGGAAAGAACAAGAGAGAAGACAAGGTTGAAGAAGCTTGTTCATCAAGAATCATCAAAGGGAAACAATAACAATAATAATAATAATAATAATAACAATAACAATGATGAGAATGTTGGATTGAATCGATTGAATTCATGGAACCCCTTTGAGAATGTTGAAGAATCTGCAGGTACTAATACTAATGCTACTAATAGTAATCATAATCAAGGTTTGAATGAAGAATCAAGTTCTCATCATCAGCCTTGTGATTATGAAGAAGAATCTCTTGTGACTATGAGCAAATGGAGCCCAACAATGATCTTCAATCCTCTCATCAATAACAACTCATCAATCCTTCAAGAACATCATCAATTTGCAGAATTTCATCATCAGACCATGGGAAAACCCTGGGAGGCTTACAACAATGAAGTGTAA 1293 0.423 MYSSPNSSNTIPFINGNNHDHQIFPYPSSSSSSSNVIRPFSIESNPSSSSSKQEQANNNCPSSPSFSFFQFPYSPLFEDNEIFLNGEFHFLYHHHHQNQHQSLTRPDRDNDEAGAANMEVVSVSNAIKNNNTTTQGMIVSAATVATTTPVAATTTAAATKTTPTRRRSSKRDRHSKINTARGLRDRRMRLSLEIKQLAREKKKNHHHHHQSCSSEFNNGGKSASSTSECEGVSSLDEVAISQSQLQEEKLLPPSPPPLPTRTRKRRGSNKASRKSAFNQIGKESREKARERARERTREKTRLKKLVHQESSKGNNNNNNNNNNNNNNDENVGLNRLNSWNPFENVEESAGTNTNATNSNHNQGLNEESSSHHQPCDYEEESLVTMSKWSPTMIFNPLINNNSSILQEHHQFAEFHHQTMGKPWEAYNNEV 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151335g00007 430 MobiDBLite consensus disorder prediction 279 308 - -
Stsc151335g00007 430 MobiDBLite consensus disorder prediction 35 61 - -
Stsc151335g00007 430 Pfam TCP family transcription factor 169 194 IPR017887 -
Stsc151335g00007 430 Pfam TCP family transcription factor 194 301 IPR017887 -
Stsc151335g00007 430 MobiDBLite consensus disorder prediction 153 186 - -
Stsc151335g00007 430 Coils Coil 180 200 - -
Stsc151335g00007 430 ProSiteProfiles R domain profile. 282 299 IPR017888 -
Stsc151335g00007 430 MobiDBLite consensus disorder prediction 199 377 - -
Stsc151335g00007 430 PANTHER CYSTEINE AND GLYCINE-RICH PROTEIN 2 BINDING PROTEIN 7 403 - -
Stsc151335g00007 430 Coils Coil 285 305 - -
Stsc151335g00007 430 MobiDBLite consensus disorder prediction 309 370 - -
Stsc151335g00007 430 MobiDBLite consensus disorder prediction 213 249 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151335g00007 165 194 TCP Transcription Factor Family AT1G68800 76.667 3.72e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc151335g00007 TCP 0.00011 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151335g00007 - - adu:107471910 343.199