Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151335g00002 | ATGTCATCATCAAGTGGAACCAGTTGGAGCTATGAAGAAGAGAAAGCATTTGAGAATGCCATAGCCATGCATTGGATTGAAGATGACTCAAAAGAGCAATGGGAGAAGATTGCTTCAGAGGTTCCAAGCAAAACCATAGAAGAATTGAAGCAACATTACCAGTTACTAGTAGAAGATGTAACTGCAATAGAAGCTGGTCAAATACCATTCCCAAATTATACTTCAGAAGAAACTACATCTTCAAGTAAAGATCTCCATGGATCTTCTTCCAAGTCTTCAAATTCTGATAAGAGATCAAATTGTAACTATGGAAGTGGGTTCTCTGGCTTAGGACATGATTCCTCAACCACTCATAGTGGTAAAGGATCCTTGTCAAGGTCATCAGAACAAGAAAGGAGGAAAGGAATTCCATGGACAGAAGAGGAACACAGGCTATTCTTACTTGGTCTAGACAAGTTTGGAAAAGGAGATTGGAGAAGCATTTCAAGGAACTTTGTGATATCAAGAACTCCAACTCAAGTAGCAAGTCATGCTCAGAAGTACTTCATAAGATTGAACTCAATGAATAGAGATAGAAGAAGGTCTAGTATCCATGACATTACAAGTGTCAACAATGGAGATGTGGCCAATAACCAAGCACCAATTACAGGACAGCATGGAAGCACAACAATCCCTTCAAGCACAATGGCTATGGGACAATCAATGAAGCATAGAGCACAACCACACCATCATCATCATCATCCTCATATACCTGCTGGTTTAGGCATGTATGGTGCACCAGTTGGGCACCCTGTGGCTGCTCCTCCTCATGGCCATATGGCATCTGCAGTTGGAACTCCTGTCATGCTTCCGCCCGGACCGCACCCTCATCCGCATCCTCATCATCCGCCTTATGTTGTTCCTCTTGCTTATCCAATGGCACCTCCAACAATGCATCAATGA | 942 | 0.4268 | MSSSSGTSWSYEEEKAFENAIAMHWIEDDSKEQWEKIASEVPSKTIEELKQHYQLLVEDVTAIEAGQIPFPNYTSEETTSSSKDLHGSSSKSSNSDKRSNCNYGSGFSGLGHDSSTTHSGKGSLSRSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDVANNQAPITGQHGSTTIPSSTMAMGQSMKHRAQPHHHHHHPHIPAGLGMYGAPVGHPVAAPPHGHMASAVGTPVMLPPGPHPHPHPHHPPYVVPLAYPMAPPTMHQ | 313 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151335g00002 | 313 | SUPERFAMILY | Homeodomain-like | 8 | 63 | IPR009057 | - | |
Stsc151335g00002 | 313 | CDD | SANT | 137 | 182 | IPR001005 | - | |
Stsc151335g00002 | 313 | PANTHER | TRANSCRIPTION FACTOR KUA1 | 5 | 302 | - | - | |
Stsc151335g00002 | 313 | ProSiteProfiles | SANT domain profile. | 4 | 53 | IPR017884 | - | |
Stsc151335g00002 | 313 | SUPERFAMILY | Homeodomain-like | 132 | 187 | IPR009057 | - | |
Stsc151335g00002 | 313 | Gene3D | - | 136 | 188 | - | - | |
Stsc151335g00002 | 313 | CDD | SANT | 12 | 57 | IPR001005 | - | |
Stsc151335g00002 | 313 | SMART | sant | 134 | 184 | IPR001005 | - | |
Stsc151335g00002 | 313 | SMART | sant | 5 | 59 | IPR001005 | - | |
Stsc151335g00002 | 313 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 130 | 186 | IPR017930 | - | |
Stsc151335g00002 | 313 | MobiDBLite | consensus disorder prediction | 71 | 124 | - | - | |
Stsc151335g00002 | 313 | ProSiteProfiles | SANT domain profile. | 138 | 186 | IPR017884 | - | |
Stsc151335g00002 | 313 | FunFam | Transcription factor SRM1 | 1 | 70 | - | - | |
Stsc151335g00002 | 313 | Pfam | Myb-like DNA-binding domain | 137 | 182 | IPR001005 | - | |
Stsc151335g00002 | 313 | Pfam | Myb-like DNA-binding domain | 8 | 55 | IPR001005 | - | |
Stsc151335g00002 | 313 | FunFam | transcription factor MYB1R1 | 136 | 187 | - | - | |
Stsc151335g00002 | 313 | ProSiteProfiles | Myb-like domain profile. | 130 | 182 | IPR001005 | - | |
Stsc151335g00002 | 313 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 134 | 184 | IPR006447 | GO:0003677 | |
Stsc151335g00002 | 313 | ProSiteProfiles | Myb-like domain profile. | 1 | 57 | IPR001005 | - | |
Stsc151335g00002 | 313 | MobiDBLite | consensus disorder prediction | 71 | 136 | - | - | |
Stsc151335g00002 | 313 | Gene3D | - | 1 | 70 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151335g00002 | Stsc-Chr151335 | 2100 | 3231 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Stsc151335g00002 | Myb_DNA-binding | 2.7e-07 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151335g00002 | - | - | gmx:778049 | 465.692 |