Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151333g00008 ATGGCGACTCCAGAAGAGGCAAAGCTCGAAACTTTCCTCCAGTGGCTACAGCCAAATGGGGTGGAGCTAAGAGGCTGCAAGATCAAGCACTGTGATTCCAGAAAAGGATTTGGCATTTTTTCTGATAAAGATGTCTCTGATGGGGTTTTGTTGGCTGTTCCGCTTGACCTAGCAATTACTCCCATGAGGGTTTTGCAAGATCCTCTTCTAGGGCCAGCATGTAGATCTATGTTTGAAGAAGGACATGTGGATGACAGGTTACTAATGATGCTCTTGCTGACTGTGGAGCGATTGCGCGAGAATTCTCTGTGGAAGCCGTACCTTGATATGCTCCCAACCACTTTTCACAATCCACTTTGGTTTAGTGATGATGAACTTCAAGCACTAAGAGGAACAACATTATACCGTGCAACTGAGTTGCAGAAGAAAAGCCTGGTATCTTTATATGAAACCAAAGTGAAGGATTTGGTGAAGAAGCTTTTGACTCTTGATGGAGCTTCAGAGATTGAGGTGCGCTATGAAGATTTCCTTTGGTACGTTCTACTAGTGAATTGTGTGACTCCTAATAAATCCTTGGAGGCTTAA 585 0.4393 MATPEEAKLETFLQWLQPNGVELRGCKIKHCDSRKGFGIFSDKDVSDGVLLAVPLDLAITPMRVLQDPLLGPACRSMFEEGHVDDRLLMMLLLTVERLRENSLWKPYLDMLPTTFHNPLWFSDDELQALRGTTLYRATELQKKSLVSLYETKVKDLVKKLLTLDGASEIEVRYEDFLWYVLLVNCVTPNKSLEA 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151333g00008 194 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 7 183 - -
Stsc151333g00008 194 SUPERFAMILY SET domain 8 185 IPR046341 -
Stsc151333g00008 194 CDD SET_LSMT 32 183 - -
Stsc151333g00008 194 Gene3D set domain protein methyltransferase, domain 1 5 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151333g00008 Stsc-Chr151333 27460 29160 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151333g00008 1 150 NAC Transcription Factor Family AT3G56570 29.605 2.94e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151333g00008 - - gmx:100793324 303.908