Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151331g00008 ATGGCTGCAAATCAAGAAGATGTGAAACTCTTGGGAGTTATAGCAAGCCCATTTGTTTTCAGGGTGCAACTTGCTCTCAAGCTTAAGGGAGTTGAATACACATTTGTTGCACAAGATTTGAAGAACAAGAGTGAAGAGCTTCTAAAATACAACCCAATTCACAAGAAGGTGCCAGTGCTTGTTCACAATGGAAAGCCCATAAATGAGTCCCTTGTCATTGTTGAGTACATTGATGAGGCTTGGAAGGGTTACCCCATCTTACCTACTCATCCTTACAACAGAGCTTTGGCTCGTTTCTGGGCCAACTTCATAGATGACAAGGTCGTTAATTCTTCACGGAAATCTGTTTTCACGGTTGACGAAGAAGAGCGTGACAAGAACGCCAAAGAAGCAGTTGAGGCTCTACAGGTTTTGGAGAATGAAATCAAGGGAAGGTTCTTTGGAGGAGAGGAACTTGGCTTTGTAGACATTGCTGCTTCTTTCATAGCATATTGGATCCCAATACTCCAAGAAGTAGCTGGGTTACAATTGTTTACTAGTGAACAATTTCCTAAACTTTACAAATGGATCAAGAATTTCTCAACCATCCGATTGTCAAGGAAGATTTGCCTCCTAGAGATCCACTTTTTGCCTTATTCAAAGCTCGTTATGAGAGCCTTCATGCTTCAAAATAGATTAATACAAAGTGAAATTCAGAGGTGTGAGGAAATAAAGTTGTATTAG 723 0.4053 MAANQEDVKLLGVIASPFVFRVQLALKLKGVEYTFVAQDLKNKSEELLKYNPIHKKVPVLVHNGKPINESLVIVEYIDEAWKGYPILPTHPYNRALARFWANFIDDKVVNSSRKSVFTVDEEERDKNAKEAVEALQVLENEIKGRFFGGEELGFVDIAASFIAYWIPILQEVAGLQLFTSEQFPKLYKWIKNFSTIRLSRKICLLEIHFLPYSKLVMRAFMLQNRLIQSEIQRCEEIKLY 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151331g00008 240 Coils Coil 121 141 - -
Stsc151331g00008 240 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 194 IPR045073 -
Stsc151331g00008 240 CDD GST_N_Tau 8 81 - -
Stsc151331g00008 240 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 215 IPR010987 -
Stsc151331g00008 240 SUPERFAMILY GST C-terminal domain-like 79 201 IPR036282 -
Stsc151331g00008 240 FunFam Tau class glutathione S-transferase 87 221 - -
Stsc151331g00008 240 SFLD Main.3: Omega- and Tau-like 4 202 IPR045073 -
Stsc151331g00008 240 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Stsc151331g00008 240 Gene3D - 90 219 - -
Stsc151331g00008 240 SFLD Glutathione Transferase (cytosolic) 4 202 IPR040079 -
Stsc151331g00008 240 Gene3D Glutaredoxin 1 89 - -
Stsc151331g00008 240 CDD GST_C_Tau 91 193 IPR045074 GO:0004364|GO:0006749
Stsc151331g00008 240 Pfam Glutathione S-transferase, C-terminal domain 115 194 IPR004046 -
Stsc151331g00008 240 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Stsc151331g00008 240 FunFam Glutathione S-transferase GSTU6 3 87 - -
Stsc151331g00008 240 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151331g00008 Stsc-Chr151331 55573 57022 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151331g00008 4 193 Glutathione S-transferase Gene Family AT3G09270 55.155 1.56e-70 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151331g00008 K00799 - gmx:100500680 288.115