Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151322g00006 ATGAAGGTGGTATTGGCAATGATGCTGCAACTTCTTAAGCTCTGCATCATTTTTCTTTCTATTGCTGTCCCACGATCCAAAGGGTCTACTGCATCTCCATCTCCAGCATTCCTTCCTGTGATTCCTTCTATACCAGAAGCACTTAGTCCTATCCATCATGAAGGCTCAATTGGAAGCAATGCACCAGGTTTACCATTACTTCCACATGGTTCAGGCCTTGTTGTACCTCCATCTCCAGCAAGTGGTTCATGGTCTACCATTGCCCCAAGCTCTCCAGCAGTAGCAAATGGGTCATTCTTGCTTCCTCCTGAACCATTACCACTTCCTGCATCAGCTCCAACTTCCTCAACTCCAAGTCCAGCTACTATGGCATTGTCACCACCACATGAGGGTGTTCCTTTTCCTCCAATAGCACAAGGAATTGCACCGCCGCCCTTAAGATCAAGTCCACCGCAAGGGAAAGCACCTGCTGAACATGGAACTCTAGCACCTAACATTGTTAATGGGAATGCAAATAAGAGTCACACAGAAGAGCCGGTTTCGCCATCACCAGCTGCAACACCTTCTATCAATTTGCCGAAAATTTCACCAACCAGCCAACCAACCAATAATGGAAGTTTACCTCCTCAAGAGAGCACAAATAAAGGCCACAATCCAGAACCAGTTACACCAGAATCTGCTGCATCACCACCATGGAAAGCAGAACATAACCCACCACCACAACCGCCACCAACACCACCAGAAGCACACCCTATTAGTCCATCCATATTGCCTGCACCCGTTGCATCACCAGCAAGTTCATTTCCATTGAATCCGCCTCTGTTCCATCCAGTTATTCCATCGACATTACCAGCACCTGTTGCCTCTCCCAAGTCATCTCCTTCTGGAAGCTTCCATTGGAAAAATGGTGGTGCACCACCAATTTCTGTACCTTTATACAAATCACCAAAGCCACTTCCAGCTGTAGTACATTCCCCTGCTCAAGCTCCTGCTGCACATAAAGCAAGGCAAATTGATCATGCTCCTGAGCCTAAAAATCCTAAAAAACAAAAGCATACTCCTGCATTGTCACCTCCTGCCTCATCACATGAGCATCACCATTGGAACACAAGTACCAGTTCTTCTGCTCCCCCTCTACCATCACCAGACACGGTTTCTCCTCCCACTTCAAATCATCAAGATAAAGCAATTCCTCCTTCATTACATCCAGAAAGTGGGAAAAGGCATCATGTTTCACCTCCAATAATGAACCAAAGTTCTTCAATTCCTTCATTCTCTTCCCCAACTCATTCACCCATGACCCAAGTTTCATCAACTCCTTCTCCATCAATGGAATTTGCTCCTCACACAACTGAAATTCAAGCTCCATTTCTTCCCCCTAAAGTATCTCCTTCTCCCCCAAAGACACCACCCCTGCCTCAAGTTCGAGCATTGCCACCACCACCTCCAAATAAAGAGTGTTCATCAACCATCTGCTTAGAACCTTATACAAACTCTCCACCCGGAGCACCTTGCAGATGTGTTTGGCCCATGCGAGTCGGTCTCCGCCTCAGTGTCTCTCTTTATACCTTCTTCCCTTTGGTTTCAGAGCTGGCTTCTGAAATTGCCACTGGAGTTTTCATGAAGCAAAGTCAAGTTCGGATTATGGGAGCAAATGCAGATGAGCAACCTGAGAAAACAGTTGTCTTAATTGATCTGGTACCACTTGGTGAAACCTTTGACAGTACTACAGCACTTTTCACTTCCAACAGATTCTGGCATAAACAGGTTGCTATAAAAGCTTCCTACTTTGGAGACTATGATGTACTATACGTGACCTATCCAGGTTTGGCTCCTTCTCCTCCTTTACCACCTTCAACCATTTCCATCATTGATGGTGGTCCATATTCCATTGGTGGCAACAATGGAGGGACAATAAAGCCCCTTGGCGTCGACATACAGAAGAGGCAGCACAAAAGTGGACTTAGCAGAGGCATAGTTGCCATTATAACTGTTTCAGTTTTTCTAGCAGTTGTGTTATGTGCCGCCGCCGCAGCAGCTTGGGTTATGCTCAAGTATGGAGATCATGTTACTCAACCAGCATCAACACCACGGATTTCACAGCCTTCTCTTACCAAACCACCAGGTAATGCTGCGTCATTAGTTGGTGGAGGTGGGGTTGGTTCTGCTTCGACATCATTTCGATCTAGCATTGCTGCTTATACAGGGTCTGCTAAGACTTTCAGTGCAAATGACATTATAAAAGCCACTGATAACTTTGATGGTTCAAGAATACTTGGAGAAGGCGGTTTTGGGCTTGTTTATGGTGGCATCCTTGAAGATGGAACAAAAGTGGCAGTCAAGGTTATAAAGAGGGAGGATCATCATGGTGATCGCGAGTTCTTAGCCGAAGTTGAGATGCTTAGCCGTCTTCACCACAGAAATTTGGTCAAGTTGATTGGGATATGTACAGAGGAGAGTGTCCGCTGCTTGATTTATGAACTTGTTCCAAATGGCAGCGTGGAATCCCACTTACATGGAGTTGACAGGGAAAATAGCCCACTTGGTTGGAGTGCTCGGATGAAGATAGCTCTCGGCGCAGCTCGAGGTCTAGCCTATCTGCACGAAGATTCGAGCCCCTGTGTTATACACCGGGACTTCAAATCAAGCAACATATTGCTGGAAGATGATTTCACACCAAAAGTATCTGATTTCGGATTGGCTCGAACAGCAACAGATGAGAATAATAGACACATATCAACGCGCGTCATGGGAACTTTCGGTTATGTAGCTCCAGAGTATGCAATGACAGGGCACCTTCTTGTTAAGAGTGATGTTTACAGCTACGGTGTTGTTCTTCTTGAGCTTTTAACAGGAAGAAAGCCAGTGGACATGTCACAACCTCCAGGTCAAGAGAACCTTGTTGCGTGGGCTCGTCCGCTTCTGGCGAGCCGAGAAGGATTGGAGGCAATAGTGGATCCATATCTTGGAGGAGATGTGGCTTTTGAGAGTGTAGCCAAAGTTGCAGCCATTGCTTCCATGTGTGTGCAGCCAGAGGTATCGAACCGGCCTTTCATGGGGGAGGTTGTGCAGGCCTTAAAACTAGTATGTAATGAATGCGAGGAACCGAAAGAAGAAGAAGAAGAAGGAGAAGGAGAGGGTTGTTCTAGAAGATCTACACATGATTTGGATGTGAGAGGGAGTAATGTGTCTGAGATGGAACTGTGGGGTGGTGTTGATGTTGAGAGAGGATTCAGCTGTTCAGTTAGAGTGGGGAGGGAGGAGGAGGAATCTGGATCTTTTAGGAGACACTCGTATTCGGGACCTCTGGTGACGGGAAGAAGCAGGCAGTTGTGGCATATTATGAGACGACTTTCTGGTGGCACTCTCAGTGAACATTCAACTCTCTTCAAGTTATAG 3399 0.464 MKVVLAMMLQLLKLCIIFLSIAVPRSKGSTASPSPAFLPVIPSIPEALSPIHHEGSIGSNAPGLPLLPHGSGLVVPPSPASGSWSTIAPSSPAVANGSFLLPPEPLPLPASAPTSSTPSPATMALSPPHEGVPFPPIAQGIAPPPLRSSPPQGKAPAEHGTLAPNIVNGNANKSHTEEPVSPSPAATPSINLPKISPTSQPTNNGSLPPQESTNKGHNPEPVTPESAASPPWKAEHNPPPQPPPTPPEAHPISPSILPAPVASPASSFPLNPPLFHPVIPSTLPAPVASPKSSPSGSFHWKNGGAPPISVPLYKSPKPLPAVVHSPAQAPAAHKARQIDHAPEPKNPKKQKHTPALSPPASSHEHHHWNTSTSSSAPPLPSPDTVSPPTSNHQDKAIPPSLHPESGKRHHVSPPIMNQSSSIPSFSSPTHSPMTQVSSTPSPSMEFAPHTTEIQAPFLPPKVSPSPPKTPPLPQVRALPPPPPNKECSSTICLEPYTNSPPGAPCRCVWPMRVGLRLSVSLYTFFPLVSELASEIATGVFMKQSQVRIMGANADEQPEKTVVLIDLVPLGETFDSTTALFTSNRFWHKQVAIKASYFGDYDVLYVTYPGLAPSPPLPPSTISIIDGGPYSIGGNNGGTIKPLGVDIQKRQHKSGLSRGIVAIITVSVFLAVVLCAAAAAAWVMLKYGDHVTQPASTPRISQPSLTKPPGNAASLVGGGGVGSASTSFRSSIAAYTGSAKTFSANDIIKATDNFDGSRILGEGGFGLVYGGILEDGTKVAVKVIKREDHHGDREFLAEVEMLSRLHHRNLVKLIGICTEESVRCLIYELVPNGSVESHLHGVDRENSPLGWSARMKIALGAARGLAYLHEDSSPCVIHRDFKSSNILLEDDFTPKVSDFGLARTATDENNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVAWARPLLASREGLEAIVDPYLGGDVAFESVAKVAAIASMCVQPEVSNRPFMGEVVQALKLVCNECEEPKEEEEEGEGEGCSRRSTHDLDVRGSNVSEMELWGGVDVERGFSCSVRVGREEEESGSFRRHSYSGPLVTGRSRQLWHIMRRLSGGTLSEHSTLFKL 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151322g00006 1132 MobiDBLite consensus disorder prediction 1036 1055 - -
Stsc151322g00006 1132 MobiDBLite consensus disorder prediction 412 448 - -
Stsc151322g00006 1132 MobiDBLite consensus disorder prediction 129 151 - -
Stsc151322g00006 1132 MobiDBLite consensus disorder prediction 105 482 - -
Stsc151322g00006 1132 ProSitePatterns Protein kinases ATP-binding region signature. 759 781 IPR017441 GO:0005524
Stsc151322g00006 1132 Gene3D Phosphorylase Kinase; domain 1 725 828 - -
Stsc151322g00006 1132 Gene3D Transferase(Phosphotransferase) domain 1 829 1052 - -
Stsc151322g00006 1132 SUPERFAMILY Protein kinase-like (PK-like) 733 1026 IPR011009 -
Stsc151322g00006 1132 FunFam Receptor-like serine/threonine-protein kinase ALE2 829 1043 - -
Stsc151322g00006 1132 PANTHER OS01G0750732 PROTEIN 479 1054 - -
Stsc151322g00006 1132 MobiDBLite consensus disorder prediction 165 220 - -
Stsc151322g00006 1132 MobiDBLite consensus disorder prediction 336 350 - -
Stsc151322g00006 1132 MobiDBLite consensus disorder prediction 459 482 - -
Stsc151322g00006 1132 MobiDBLite consensus disorder prediction 265 284 - -
Stsc151322g00006 1132 Pfam Protein tyrosine and serine/threonine kinase 757 1024 IPR001245 GO:0004672|GO:0006468
Stsc151322g00006 1132 CDD STKc_IRAK 759 1027 - -
Stsc151322g00006 1132 MobiDBLite consensus disorder prediction 363 379 - -
Stsc151322g00006 1132 ProSitePatterns Serine/Threonine protein kinases active-site signature. 875 887 IPR008271 GO:0004672|GO:0006468
Stsc151322g00006 1132 ProSiteProfiles Protein kinase domain profile. 753 1029 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151322g00006 1132 FunFam receptor-like serine/threonine-protein kinase ALE2 726 828 - -
Stsc151322g00006 1132 MobiDBLite consensus disorder prediction 233 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151322g00006 Stsc-Chr151322 32898 38316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151322g00006 180 1128 Receptor kinase-like Gene Family AT5G56890 52.989 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Stsc151322g00006 PK_Tyr_Ser-Thr 2.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151322g00006 - - adu:107458134 1628.22