Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151316g00010 ATGAAGGGGGATAGAATTGAGGAGAGTAGTGGGAGTGTGAGGCTGTTGGGAAGAAAAGGGAGCAACAGCAGTGGTGGGAGCAGTGAATCTTCAAGGTGGGTTGATGGCAGTGAAGTGGTGGATTGTGATGAGGTTCCTCCATGGTCAAAGCTCCATGATAGTGATGGTAGAGAAGGGTATGGAACAACAATTAGGAGGAGGCTTGTTAAGAAGCCCAAGAGGGTTGATTCCTTTGATGTTGAAGCCATGGAAATTGGTGGAGCTCATGGTCAACACACTAAGGATATGTCCCTTTGGCCCACCCTTCTATTAGCATTTAAGACTCTTGGTGTTGTATATGGTGATATGGGAACAAGTCCTCTATATGTTTTTTCTGATGTCTTCAGCAAGGTTCCAATTGAATCAGATGTTGATGTCTTGGGGGCTTTATCATTAGTAATGTACACAATTGCGCTTATCCCACTAGCCAAGTATGTGTTTATAGTGCTCAAAGCAAATGATAATGGAGAAGGAGGAACATTTGCACTATACTCACTGATTTGTAGGTATGCAAAGGTGAGTATGCTTCCGAATCGTCAACAAGCTGACGAGCACATCTCTAGTTTTAAGCTCAAACTGCCTACTCCAGAGCTAGAAAGGGCTTTGAAAATAAAGGAGACTTTGGAAAGGAAGGCAACTTTGAAAAATCTTTTGCTGGTGTTGGTTTTGTTGGGAACTTCCATGATTATTGGAGATGGTATTCTAACCCCAGCTATATCAGTAATGTCTGCCATAAGTGGTCTGCAAGGTCAAGTAAAAGGATTTGGAACGGGTGCTTTGGTTGGTGTTTCAATTGTAGTCCTAGTAGCTTTGTTCAGCATACAGCGGTTTGGTACCAGTAAAGTGGGATTCATGTTTGCTCCAGTCCTTGCTTTATGGTTCTTTTCTCTTGGTTCTATTGGACTATATAACATATTTACTTATGATATTACGGTTCTGAGAGCAATCAATCCAGCTTATGTATATTATTTCTTCAAGAATAATGGCAAAGGTGCATGGTCAGCTCTTGGTGGTTGTGTTTTGTGTATTACAGGTGCAGAAGCAATGTTTGCAGACCTGGGTCATTTTTCTGTACCAGCAATACAGATTGCCTTCACTAGTGTGGTATTTCCTTGTCTCCTCCTCGCTTATATGGGCCAAGCTGCTTATTTGATGAAGAATCCCCATTCTTATTCAAGGATATTCTATGATTCTGTTCCTGAAAGTCTCTTCTGGCCAGTGTTTGTTGTGGCCACACTAGCTGCTATGATTGCCAGTCAAGCAATGATATCAGCCACATTTTCATGTGTGAAGCAATCTATGGCTTTAGGATGCTTCCCCAGGCTGAAGATAATTCATACATCAAGAAAGTTCATGGGCCAAATTTACATCCCTGTAATGAATTGGTTTCTAATGATCATGTGCATAATTGTTGTTTCAATCTTCCAAAGCACTACCGATATTGCGAATGCATATGGCATTGCTGAAGTTGGTGTGATGATGGTTAGCACTGCCTTAGTGACACTTGTAATGCTTCTAATTTGGCAGACTAATCTGTTTTTGGCGCTTTGTTTCCCGTTGGTTTTCGGTTCCGTGGAGCTGATTTACATGTCTGCTGTCCTCTCAAAGCTCTTTGAGGGTGGCTGGCTTCCTCTTGCCTTTGCTACCTTCTTCCTCTCTGTCATGTATACCTGGAACTATGGCAGTGTATTGAAGTACCGAAGCGAAGTCAGAGAGAAAATCTCAGCAGACTTGATGCTTGATCTTGGCTCCAATCTTGGAACACTAAGAGTTCCTGGAATTGGATTGCTATATAATGAGCTTGTCCAAGGCATTCCCTCCATTTTCTTGCAGTTCTTGCTAAGCCTTCCTGCTGTTCACTCTACCATAGTTTTTGTCTGCATTAAATATGTTCCGGTCCCTGTGGTTCCTCAGGAGGAAAGGTTTCTATTTCGAAGAGTTTGCCCGAAAGATTACCATATGTTCCGTTGTGTTGCAAGGTATGGTTACAAAGATGTAAGGAAAGAAGATCACCACGCATTCGAGCAACTTCTTATTGAGAGCCTTGAGAAATTCTTGAGAAGGGAAGCTCAAGAAGCTGCCTTGGAATTGGAAGGTGCATTAACCGAAGACACGGATAATGTCTCGGTGAAATCAATGGATACTGAACATCATCATGCTGCTGGCAATGATGCAGATGAGCTTCAGGTTCCACTTATGCAAGGTCAAAATTTAGGAGGAGAAGGAACTTCCTCTACCTTGCAGGAACCTGAATCATCAGCATTGCCATTACAATTACCTTCCAGCTATATGTCATCACCGGCCGAAGATCCCGGTCTGGAGTATGAGCTTTCAGCACTTAGAGAAGCAATGGAATCAGGATGCACTTATTTGCTTGGACATGGGGATGTGAGGGCAAAGAAGAACTCTTTCTTCTTCAAGAAGTTAGTGATAAACTACTTCTATGGATTTCTTAGGAAGAACTGCAGAGGTGGCACAGCAAACATGAAAGTGCCTCACACCAATATCATTCAGGTTGGGATGACATACATGGTCTGA 2577 0.4253 MKGDRIEESSGSVRLLGRKGSNSSGGSSESSRWVDGSEVVDCDEVPPWSKLHDSDGREGYGTTIRRRLVKKPKRVDSFDVEAMEIGGAHGQHTKDMSLWPTLLLAFKTLGVVYGDMGTSPLYVFSDVFSKVPIESDVDVLGALSLVMYTIALIPLAKYVFIVLKANDNGEGGTFALYSLICRYAKVSMLPNRQQADEHISSFKLKLPTPELERALKIKETLERKATLKNLLLVLVLLGTSMIIGDGILTPAISVMSAISGLQGQVKGFGTGALVGVSIVVLVALFSIQRFGTSKVGFMFAPVLALWFFSLGSIGLYNIFTYDITVLRAINPAYVYYFFKNNGKGAWSALGGCVLCITGAEAMFADLGHFSVPAIQIAFTSVVFPCLLLAYMGQAAYLMKNPHSYSRIFYDSVPESLFWPVFVVATLAAMIASQAMISATFSCVKQSMALGCFPRLKIIHTSRKFMGQIYIPVMNWFLMIMCIIVVSIFQSTTDIANAYGIAEVGVMMVSTALVTLVMLLIWQTNLFLALCFPLVFGSVELIYMSAVLSKLFEGGWLPLAFATFFLSVMYTWNYGSVLKYRSEVREKISADLMLDLGSNLGTLRVPGIGLLYNELVQGIPSIFLQFLLSLPAVHSTIVFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCVARYGYKDVRKEDHHAFEQLLIESLEKFLRREAQEAALELEGALTEDTDNVSVKSMDTEHHHAAGNDADELQVPLMQGQNLGGEGTSSTLQEPESSALPLQLPSSYMSSPAEDPGLEYELSALREAMESGCTYLLGHGDVRAKKNSFFFKKLVINYFYGFLRKNCRGGTANMKVPHTNIIQVGMTYMV 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151316g00010 858 MobiDBLite consensus disorder prediction 15 34 - -
Stsc151316g00010 858 MobiDBLite consensus disorder prediction 1 38 - -
Stsc151316g00010 858 NCBIfam potassium uptake protein 104 857 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc151316g00010 858 MobiDBLite consensus disorder prediction 748 767 - -
Stsc151316g00010 858 Pfam K+ potassium transporter 105 678 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc151316g00010 858 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 98 856 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc151316g00010 858 MobiDBLite consensus disorder prediction 749 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151316g00010 Stsc-Chr151316 43332 47369 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151316g00010 4 858 Inorganic Solute Cotransporters AT1G60160 74.709 0.0 1253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151316g00010 K03549 - gmx:100814419 1350.5