Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151315g00007 ATGGAATGTGTAACGGGCATTGTATCTGGAGTTTTGTCAAAAATAGCTGAGCTGCTGATTGAACCAATTGGTGCAAACTGTGCCTATTTGGTTTCCTATGATGACAACATCACCAGCCTGAATAATGCACTTAAGGCGTTGGAAAACAAGAAACAAGAAATTCTATCCAAGGTGCTTGAAGAGAAGAACAATGGCCGTGACATTCTGCTACATGCGGAAGAGTGGCTCCATAAGGTTGAAGAAATTCAAGCAGATTTAGCAAGATTCAAAGAGGAGGCCAGAAGGAACAAGAAGTGTCTTGGCGGATGGTGTCCCAATCTGAAAACTCGCTATTCATTTAGCAAGAATGCCAAGAAGAACGCTGACAAGCTTGTGCAACTGAAGGAGCAAAAACCTGAGATCATATCCACCTCTGCACCTCCATTGAAGTATGGGGAATTCTTTTCAACAAAGGGCATCAAAAGCTTTGAGTCTCGGAACAAGATTGTAAAAGGTGTCGTTGAGAAGCTCAAGGAAGAAGGCTGTAACAAGATCAGCATCTGTGGGATGGGCGGAGTGGGTAAAACCACTCTCGTGACTGAAGTGATCAAAATTGTAGAAGCAGAGAAGCTTTTCGACAAGATTGCAATGGTGACTGTGTCTCAAACTCCCAATATCAGCAAGATTCAAAGTGATATTGCTGCTAGGTTGGGTCTAACACTAACTGGAAAGAATTCAGAAACAATAACTGCCCAACAAATCCTAGCTAAGATTAACAAAAGCCATGGGGTCTTGATAGTGCTTGATGATGTGTGGATGGAGCTAGATCTTGTGTCAATTGGAATTCCATCCAATGGGAATCATAACACTTGCAAAGTGATATTCACTTCAAGAAAGGAAGGGGAGTGCTCCAAGATGGGGAGTCAAAAAACTTTCACTGTTAACACCTTGTCCAAGGAAGACTCGTGGGCCTTATTTGAGGAGATAGTAGGTGGTGATGTGGTGAACAAATCTAAGATTCGTCTCGTTGCAGAGGATATTGCCAAGCAGTGTGGGGGATTACCCATTGCTCTTGTCACGGTTGGAAAAGCACTTCGCGGGAAAGGGGAGAAGTATGTTTGGGAGAATGCACTTAAAGATTTAAGAACATCCTCGACATCTTTCTCAGAAGTGGAGAAGTGTATTGAGCTGAGTTACACTCTGTTGGATAAAAGGAATGCAAAGGATCTCCTTTTTCTGTGTTGCTCATTTCCTGAAGACACTGATATTCCTATTGAGGTTCTTCTGAGGGAAGGATGGGGTCTGGGAAAATTGTTTCCAGACGAAGATTATTCATTGTATGAAGCAAGGAATAAGACACATTCCTTGGTGGATGATCTCAAGGCATGCTACCTGCTTTTGGATAGTGACGAGAAAGAATGTGTGAAGATGCATGATGTTGTGCGCGATGTGATCACATCCATCGCATCCAAGAAGGAAGATCACAAGATACAGTGTGAGGATGTAGTGAAATGGAGGCAGGACATAAGCACAAGCAGTTCTTGTAGTGCAATTTCAATCAGGACTTCTGCAGTGGAGTCTCCCAATGTGGTGGACTATCCAAAGCTTGAGATCCTTCGAGCTGAACCATCCATCAGTTGGTGGAGTAAAATATCCATCCCAGCAAATTTGTTTCGTGGCATGAGTAATCTCAAGGTTTTGTATTTGTTTGCATCATTCATTCCAAATGCTTCAGCTCTCTTTCCTACCTTGAAGTGTCTTCGAACGTTGCGCTTAGAAGGCTGTGAGTTTGGAGATGCATCCATAATTGGTAAGGAGCTTCTGGCACTTGAAATTCTCAGCTTTGCACGTTCAGGCATCGTAGAGTTACCAACTGAAATAGGGCAGTTATGTTCTCTAAGATTGTTGGATTTGACTAACTGTGATAAGTTGTGGAAAATATGTTCTGATGTGTTGGCAAGATTACATCGATTAGAAGAATTTTATTTCATGACTGGAAGTTTTCGATGGATGCAAAACCGTGATTTTGTAGATGAGTTACAAACTGTATTCCGTCAGCTAAAGGTTGTTGAGATTGCAATAAAGAAGGGTGAATCAGTTTTCAAGGATTTGAGCTTTCAAAACGTGTCAAGATTTCTGGTCCAACTGGGAGCTTATTATACTCGCAGTTATAGTAACTCTGCAGAATATATGAGGCCAAATATTTTAGAGTTGAGAGGTGTTAATTACAACTCTATTGAGGGGAGCAAGCTGATTACTCAATTGGTTCAAAGATGTGAAATTCTCAAAATTTTGAAAGTAAAGAACTTGAAAAATATATGTTTTGGTTCAAAAGGTGGTGTTGAACTGTCATGTTTAAAAGATCTATGGATAGCATACTGTTCTGATCTGGAATGTCTCACAGAAGAAGATGGTGGAGAGCATAAATCAACGAGTAATATGAACAAGTCTCAATTCCAACATTTGGAGACAATTGTGATAGAAAGATGCAAATCCTTATCCATGGCATTTAACTCTCAAGCATTCCAGAATCTGAGAGATTTGTCAATCAAAGAATGTGACTCTATAAAGCATATATTTACCCCTGCCAATGGTGAAGTAATGCCACAACTAGAGAAATTACAGATTATGGGGTGCAAAGAGATGTCAAATTTAGTGGGCTGCAGTAAAGATAAGGAAGCAGCAGAGGATTACAAATGTGAAGGAAAAGTGAAGAGTATAGTTTTCAAAAAATTATATCATTTATCACTTTACGATCTCCCAAAGCTTGATAGCTTTTGTGCAAATTCCTATGAGCAAGTACAGTGTCCATCGCTAATGCATTTGCATATTGTTGATTGTCCTATGCTAAAAGCACCATCATTGCAGAATCACATCCCACAAGAAAGCAATTCCTTAGATATGGTATTTGATCCGCAAGGATTTCAAAGCTTGAGATTTTTGACGATCTCACGTTGTCATTCTGTAACACATATGTTTACTCCTGACATGAACAAAGTTGTACCAGAGCTTGAAGAATTAAAGATTAGCTCATGCAAGAAGATGACAAGTATAGTGGGTGAGAGCAAAAATGACAGAGAAGTGAATACTATAGTTTTCAAAAAGCTATATTCTTTATCACTTGATGATCTCCCAAAGTGTGAGAGCATCTGTTCAAATTCCTGTGATACAGAATGGCCATCCCTAAGACAATTGAACATTCAGCGTTGTCCTGTGTTGAAGTCATTACCATTGTTTCAAATTCAAAAGCATTTAATGCAAGAGAATGCTGATGGGGTCACTTCTTATTCAAATACCACAGAAAACAAGTCAAGTCATTCTAATTGCTTTCTTGAATGTGCACCAGCTCTATCCAGATTTATTCACCAAGCCAACACAAATAAGATGCCGGATAAGACAGAAACAATAGCTAAGGATCAACCATCTTCTATTACCATGATGGAGAGTATGCTTATTCTCGAGAAGATTTTTATCAATGGATGTGATGATATGCAAAATATGCATTTAGTTGGGAAAAACTATGACCCAACCATTCATTCACAACTGAAAACTATCCAAATTAGAAGATGCGAAAAGTTAGCATCTATTGTGTCTAAGACTAATGGAGAAGAGATGATGGGATATTTTTCTGAACTACAATCTCTTGAGTTGAAGAATCTACCAAATCTTTCAAGCTTTTGTTGCCCTGAGGGTGCATGCGAGGGAAACCAAATACAACTTGTTCCCTTTATAGATGTAGATGTCTTTTTGTTTTCTAACTTAAAATCTCTGGTCATTAGAGAATGTAACAAGATTCACATCTTGTTATCTTCATCATCCTCAAAAAGCCTTGGGTGTCTTGAGCAACTGAAGTTACAAGATTGTAAGAACATAGTTGAAATTGTATCTGCAAACAAGATTGCGTTTCCTAAACTGGAAAAGCTATTTCTTGAAGGACTTCCAAAGCTCAAAAGTTTCATCCAAGGACGCAATAACTTAGATTTTCCATCATTGCAAACTGTGGAAATTATAGGTTGCCCCAGCATGGGAATGTTTTCACAAGGGTCTTCAAATACACCAAAGCTCAAGGATTTCAAAATAGAGATAGAACCATATGCCTGCAACTATGTACATAAAGGCGACTTGAATGTTACTATAAAAGGATTTAAAGCCTTTGTGGAATTACAAGATGTAGAGATGTTGAGTTGGAATGATCATCACAATGAAGGCTTAACATACTTCATTAACTCAGAAATGGATCTAGAAAGGTTTCATAAACTAAGGATGGTTGTTCCATTCAATGACAGACGCAAGCTTCAAAATATGAGCAGACTCTGCATAAAAAGTTGTAATTCATTAGTTGAGGTGTTCCAATCCAAAGAAGAAATAACGGATGCAAAAGAAAGGGATGATGAAAGCATACATTATGAGCTAAGAAGCATGACCTTGAAGAGTTTACCAGAACTAAGGCACGTTTGGGGACCCAAACTTATGAGACTTGTAACCTTTGACAAGCTAACATCGATCACTATTGAATATTGCGATAGTTTGAAGAGCTTAATGTCCCACTCCATGGCCGAAAGTCTTGTTCATCTTGAAAACCTAAGGGTTGAATATTGCGGCATGATGGAAGCAATAGTAACAGAGGAATATGACGATGACAACAGAGAAAAAGAAGTGTTAGAAAGGGAGAAAAAGAAAATCAAGGATGTATATCTCTCACGGTTGCCAAAGCTTTTGAGTCTAACTTTGCCAAATGTGCTTGAACGTGTGAAGAATCTCACAATAAGTTATTGTGATTCACTACAAAAGGTCTTTGAATCAGAAGAAGTATTTGATGTAAACCAAGGAAATGTGACCACACAGTATGAGATAGAAAGCATGGAATTATGGATGTTACCAAAGCTGACGCACATTTGGGGGGCCAGCATAAACAGAAAGCTTGTAAGCTTTGATAAGCTAACATCAATCGAGATTCGCTTCTGCAACAGTTTAAAGAGTTTGCTCTCTTATTCAATGGCTGAAAACCTTGTGCAACTTCAAGAACTAGTCGTTAAAAACTGTGACATGATGGAGGTGATTGTTACAACAAAAGATGAGACCATAGATAACAGAGGCAACAAAGCTATATCTTTATTCCCAATTTACAGAAGTTGA 5115 0.3881 MECVTGIVSGVLSKIAELLIEPIGANCAYLVSYDDNITSLNNALKALENKKQEILSKVLEEKNNGRDILLHAEEWLHKVEEIQADLARFKEEARRNKKCLGGWCPNLKTRYSFSKNAKKNADKLVQLKEQKPEIISTSAPPLKYGEFFSTKGIKSFESRNKIVKGVVEKLKEEGCNKISICGMGGVGKTTLVTEVIKIVEAEKLFDKIAMVTVSQTPNISKIQSDIAARLGLTLTGKNSETITAQQILAKINKSHGVLIVLDDVWMELDLVSIGIPSNGNHNTCKVIFTSRKEGECSKMGSQKTFTVNTLSKEDSWALFEEIVGGDVVNKSKIRLVAEDIAKQCGGLPIALVTVGKALRGKGEKYVWENALKDLRTSSTSFSEVEKCIELSYTLLDKRNAKDLLFLCCSFPEDTDIPIEVLLREGWGLGKLFPDEDYSLYEARNKTHSLVDDLKACYLLLDSDEKECVKMHDVVRDVITSIASKKEDHKIQCEDVVKWRQDISTSSSCSAISIRTSAVESPNVVDYPKLEILRAEPSISWWSKISIPANLFRGMSNLKVLYLFASFIPNASALFPTLKCLRTLRLEGCEFGDASIIGKELLALEILSFARSGIVELPTEIGQLCSLRLLDLTNCDKLWKICSDVLARLHRLEEFYFMTGSFRWMQNRDFVDELQTVFRQLKVVEIAIKKGESVFKDLSFQNVSRFLVQLGAYYTRSYSNSAEYMRPNILELRGVNYNSIEGSKLITQLVQRCEILKILKVKNLKNICFGSKGGVELSCLKDLWIAYCSDLECLTEEDGGEHKSTSNMNKSQFQHLETIVIERCKSLSMAFNSQAFQNLRDLSIKECDSIKHIFTPANGEVMPQLEKLQIMGCKEMSNLVGCSKDKEAAEDYKCEGKVKSIVFKKLYHLSLYDLPKLDSFCANSYEQVQCPSLMHLHIVDCPMLKAPSLQNHIPQESNSLDMVFDPQGFQSLRFLTISRCHSVTHMFTPDMNKVVPELEELKISSCKKMTSIVGESKNDREVNTIVFKKLYSLSLDDLPKCESICSNSCDTEWPSLRQLNIQRCPVLKSLPLFQIQKHLMQENADGVTSYSNTTENKSSHSNCFLECAPALSRFIHQANTNKMPDKTETIAKDQPSSITMMESMLILEKIFINGCDDMQNMHLVGKNYDPTIHSQLKTIQIRRCEKLASIVSKTNGEEMMGYFSELQSLELKNLPNLSSFCCPEGACEGNQIQLVPFIDVDVFLFSNLKSLVIRECNKIHILLSSSSSKSLGCLEQLKLQDCKNIVEIVSANKIAFPKLEKLFLEGLPKLKSFIQGRNNLDFPSLQTVEIIGCPSMGMFSQGSSNTPKLKDFKIEIEPYACNYVHKGDLNVTIKGFKAFVELQDVEMLSWNDHHNEGLTYFINSEMDLERFHKLRMVVPFNDRRKLQNMSRLCIKSCNSLVEVFQSKEEITDAKERDDESIHYELRSMTLKSLPELRHVWGPKLMRLVTFDKLTSITIEYCDSLKSLMSHSMAESLVHLENLRVEYCGMMEAIVTEEYDDDNREKEVLEREKKKIKDVYLSRLPKLLSLTLPNVLERVKNLTISYCDSLQKVFESEEVFDVNQGNVTTQYEIESMELWMLPKLTHIWGASINRKLVSFDKLTSIEIRFCNSLKSLLSYSMAENLVQLQELVVKNCDMMEVIVTTKDETIDNRGNKAISLFPIYRS 1704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151315g00007 1704 Coils Coil 1537 1557 - -
Stsc151315g00007 1704 SUPERFAMILY RNI-like 968 1218 - -
Stsc151315g00007 1704 Coils Coil 153 173 - -
Stsc151315g00007 1704 SUPERFAMILY RNI-like 1476 1677 - -
Stsc151315g00007 1704 Coils Coil 72 92 - -
Stsc151315g00007 1704 Gene3D Ribonuclease Inhibitor 1367 1698 IPR032675 -
Stsc151315g00007 1704 SUPERFAMILY L domain-like 469 946 - -
Stsc151315g00007 1704 Gene3D - 149 308 IPR027417 -
Stsc151315g00007 1704 Gene3D - 309 396 IPR042197 -
Stsc151315g00007 1704 Coils Coil 30 64 - -
Stsc151315g00007 1704 Gene3D Ribonuclease Inhibitor 898 1086 IPR032675 -
Stsc151315g00007 1704 Gene3D Ribonuclease Inhibitor 1225 1357 IPR032675 -
Stsc151315g00007 1704 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1400 1592 - -
Stsc151315g00007 1704 Gene3D Ribonuclease Inhibitor 537 884 IPR032675 -
Stsc151315g00007 1704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 398 IPR027417 -
Stsc151315g00007 1704 SUPERFAMILY RNI-like 1172 1354 - -
Stsc151315g00007 1704 PRINTS Disease resistance protein signature 177 192 - -
Stsc151315g00007 1704 PRINTS Disease resistance protein signature 251 265 - -
Stsc151315g00007 1704 PRINTS Disease resistance protein signature 621 637 - -
Stsc151315g00007 1704 PRINTS Disease resistance protein signature 344 358 - -
Stsc151315g00007 1704 FunFam Probable disease resistance protein At1g61300 147 304 - -
Stsc151315g00007 1704 Pfam NB-ARC domain 161 380 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151315g00007 Stsc-Chr151315 25149 32446 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151315g00007 178 485 WRKY Transcription Factor Family AT5G45050 24.595 2.81e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151315g00007 - - lja:Lj1g3v4058580.1 901.738