Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151315g00004 ATGGGACAGCGGACGGCGCTGGTGGCGTGGGACTTTGTGCTGTCCGCGATGTGGGTGTGCTCAGGCGTTCTTGTCAGGATGCTCGTCTTCGATGTCATGCAAGTGGGCCGCCGTAACGGTCACCTGCCTGCCGAGCTCGTCAAGATTGGGCTCTCTGTTGCCAACATGTTCCTCTTTGCGTTCCTTTGCAAGGCCACTCGTGGTGGGGCCTACAACCCCCTAACCGTTTTGTCCTCTGCCTTCTCTGGAAGCTTCCGAAGCTTCCTTTACTGTGTTGCTGCCAGGATCCCCGCTCAGGTGCTTGGATCTATAATCGGAGTTAAGCTTCTAATTGATACCATTCCTGAAGTAGGCCGTGGACCGCGCTTGAACACCGACATTCATTGGGGTGCCTTGACAGAAGGGTTACTAACATATGCAATTGTGACCATTTCTCTTGCTCTAGCCACCAATATTCGTGGAGGTTTCTTCATGAAGACTTGGATCTCTAGTCTCTCCAAGCTAACACTTCAGATACTTGGCTCCGATCTTACTGGTGGTTGTATGAACCCTGCCTCTGTAATGGGGTGGGCTTATGCTAGAGGAGATCACATAACAAAGGAGCACATTCTTGTGTACTGGATTGCCCCCATAGAGGCAACTATATTGGCGGTTTGGACATTCAAATTGTTAGTACGGCCTGTGAAAGAAGATAAAACTGCCTCAAAAACCAAATCGGATTGA 723 0.5035 MGQRTALVAWDFVLSAMWVCSGVLVRMLVFDVMQVGRRNGHLPAELVKIGLSVANMFLFAFLCKATRGGAYNPLTVLSSAFSGSFRSFLYCVAARIPAQVLGSIIGVKLLIDTIPEVGRGPRLNTDIHWGALTEGLLTYAIVTISLALATNIRGGFFMKTWISSLSKLTLQILGSDLTGGCMNPASVMGWAYARGDHITKEHILVYWIAPIEATILAVWTFKLLVRPVKEDKTASKTKSD 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151315g00004 240 PANTHER AQUAPORIN SIP2-1-RELATED 3 240 IPR044226 GO:0015267
Stsc151315g00004 240 Pfam Major intrinsic protein 12 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc151315g00004 240 SUPERFAMILY Aquaporin-like 8 232 IPR023271 -
Stsc151315g00004 240 Gene3D Glycerol uptake facilitator protein. 5 240 IPR023271 -
Stsc151315g00004 240 PRINTS Major intrinsic protein family signature 91 110 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc151315g00004 240 PRINTS Major intrinsic protein family signature 204 224 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc151315g00004 240 PRINTS Major intrinsic protein family signature 133 151 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc151315g00004 240 PRINTS Major intrinsic protein family signature 164 186 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151315g00004 Stsc-Chr151315 16035 18094 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151315g00004 4 240 Major Intrinsic Protein MIP AT3G56950 56.540 2.82e-97 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151315g00004 K09875 - gmx:100786138 347.051