Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151310g00013 ATGGGAATCGATTTGAAAGCAGGAGGTAAGTCCAAGAAGACCAAGCGTACAGCCCCCAAATCCGATGATATCTACCTCAAGCTCCTCGTCAAGCTATACCGTTTCCTTGTTCGGAGAACTGGCAGTAACTTCAATGCCGTCATCTTGAAGCGCCTTTTCATGAGCAAAGCCAACAAGCCACCGCTATCTCTGTCCCGCTTGATCCGTTACATGAAGGGAAAGGAGGGTAAGATAGCTGTAGTTGTTGGAGCTGTGACAGATGACATTAGGGTGTATGAAGTGCCTGCATTGAAGGTTACTGCCCTCAGATTCACTGAAACTGCCAGAGCTCGGATTGAGAAGGCTGGTGGCGAGTGCCTTACCTTTGATCAGCTTGCTCTTAGAGCTCCTCTTGGCCAGAACACGGTTCTTCTTAGAGGTCCGAAGAATGCCCGTGAGGCTGTCAAGCACTTTGGACCAGCTCCTGGTGTGCCCCATAGTAACACCAAGCCCTACGTCCGCTCAAAGGGACGTAAATTTGAGCGTGCTAGAGGAAGAAGGAATAGCAAAGGCTTCAGAGTTTGA 564 0.4982 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKANKPPLSLSRLIRYMKGKEGKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSNTKPYVRSKGRKFERARGRRNSKGFRV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151310g00013 187 FunFam 60S ribosomal protein L18 1 187 - -
Stsc151310g00013 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 187 IPR000039 GO:0003735|GO:0005840|GO:0006412
Stsc151310g00013 187 MobiDBLite consensus disorder prediction 150 187 - -
Stsc151310g00013 187 MobiDBLite consensus disorder prediction 170 187 - -
Stsc151310g00013 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Stsc151310g00013 187 Gene3D - 1 187 - -
Stsc151310g00013 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151310g00013 Stsc-Chr151310 57323 59078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151310g00013 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 79.570 1.96e-105 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151310g00013 K02883 - gmx:100306301 357.451