Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151307g00004 ATGAACCACTGCATGTTTGATGGAATAGGAGCCATGGAGTTTGTGAACTCATGGGGAGAAGTAGCAAGAGGCCTTCCACTCTCAATTCCACCATACCTAGACAGAAGCATTCTCAAGGCAAGGGACCCACCAAAGATTGAGTTTGTCCACAAAGAATTTGCTGACATTGAAGACAAGTCAAGCACCAACACCTTGTATGAAGATGAAAGTATGGTTTACAGGTCCTTTTGCTTTGACCCTGAGAAGCTCAAGAGCCTCAAATCTAAGGCCATGGAAGATGGGGTTCTTGATTCATGCACAACCTTTGAAGTTCTCTCAGCTTTTGTGTGGATTGCAAGAACCAAGGCACTCAAGATGTTGCCTGAACAAGAGACTAAGCTTCTCTTTGCTGTTGATGGCAGGGCCAAGTTTAATCCTCCCCTTCCCAAGGGGTATTTTGGCAATGGCATTGTCCTCACTAATTCTGTCTGCCAAGCAGGTGAACTTACAGAAAAGCCCTTCTCATGTGCTGTGAGTCAAATTCAGAATGCAATAAAGATGGTGACAGACAGTTACATGAGATCAGCCATTGATTATTTTGAAGTGACAAGAAGGCCATCACTGGCATGCACCCTGTTGATCACAACATGGTCAAGGTTGTCATTTCACACCACTGATTTTGGTTGGGGTGAGCCTGTTCTCTCAGGCCCTGTTTCACTGCCTGAGAAAGAAGTCATCTTGTTTCTCTCTCATGGCTTTGAGAGGAGAAACATCAATGTCCTTCTTGGTTTGCCTGCTCCTGTGATGAAGATCTTCCATGACTTGATGATGCAGATTTAA 819 0.4457 MNHCMFDGIGAMEFVNSWGEVARGLPLSIPPYLDRSILKARDPPKIEFVHKEFADIEDKSSTNTLYEDESMVYRSFCFDPEKLKSLKSKAMEDGVLDSCTTFEVLSAFVWIARTKALKMLPEQETKLLFAVDGRAKFNPPLPKGYFGNGIVLTNSVCQAGELTEKPFSCAVSQIQNAIKMVTDSYMRSAIDYFEVTRRPSLACTLLITTWSRLSFHTTDFGWGEPVLSGPVSLPEKEVILFLSHGFERRNINVLLGLPAPVMKIFHDLMMQI 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151307g00004 272 Gene3D - 1 53 IPR023213 -
Stsc151307g00004 272 Gene3D - 54 272 IPR023213 -
Stsc151307g00004 272 Pfam Transferase family 1 267 - -
Stsc151307g00004 272 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 262 - -
Stsc151307g00004 272 FunFam Tryptamine hydroxycinnamoyl transferase 57 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151307g00004 Stsc-Chr151307 24224 25794 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151307g00004 1 272 Monolignol Biosynthesis Gene Families AT5G48930 35.294 8.50e-57 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151307g00004 K15400 - gmx:100792433 485.337