Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151303g00006 ATGTGCCACCATCATCGAACTTCACACATCCGACATCTTGCGGAAAATGAATGTCACATAATGCATCTTGATTCCGAAAAGAAGCCTAAGAAGCTTGGAGTTGGAGACGAGAATATGAATAAAAAGAAATATGTTTCTGTGAATCCTCGTCACTGCACCTTAAACGTTGCATCTCAGAGCTCTTTGCCAAAGTCCATTGTTTATGCAGCCAAACTCCATACTTTGATAATTTTGTCAGAGTATTCCTCTGTAGATTCCACAAACCTTGCTATTCTACTCAGTCATATGAGAAGGCTCAGAGCATTAGGTTTGAGCTCTTGTTCCATTAAGGAGCTTCCACGGAGCGTTGGAGAACTACTACACTTAAGGTATCTTGACTTGTCTTTCAATCAAGATCTAAAGAAGTTGCCTCAAGCAATCTGTAATTTGCTCAATTTGCAAACTTTGAATCTCAACGGATGTCGTAGTCTTCAAAAATTACCAAAGGGAATAAGAAAATTATCCAAGTTGCGGCACCTTGAGATCCTATGGACATTGAGTCTTACCTATCTACCCAAAGGGATTGCATCCTTAACCTCACTCAGAACGTTGATCCGTTTCTTAGGGAACAGTGGTCCAAGTAGCAAAGCATGCAACCTTGGAGATGATGGAGAGTTAAACCAGGTTCAAGGGAGTATTATCATAGATGGATTGGGAGGCGAAACTAATGCCTTGGACGCCAAGAAAGCAAATCTAAAGAGTAAGAAAGATCTGCTAGGCTTGGAACTGCGGTTTTCTGCTGTAGGATCAGACAGTAACCATAAAGATGAACTTCCAAAAAAGAATAAAGATATACTTGAAGCTTTGGAAGCACCTGCTGAATTGCAAGGCCTAGGGATATTTTACTACCAAGGCGAATCGTTCCCCAAGTGGATGATAGCATTGCAGAATCTGACACATTTGTTGCTAGCTGATTGTAGTAATTGCAGTGTTCTGCCTCCTCTCGGAAAATTGTTATCACTTCAATCACTTAAGATACAGAATATGGCTAATGTGGAGAAGGTTGGTTTGGAATTTCTTGGAATAGAATCAAACAACGATGACGATGTCCAGGAAGATTCGTTTCCAAAATTGCAAGAACTTTGTTTCCAGGACATGGATAACTGGGAAGACTGGATTGGAATAAGTTGA 1170 0.4051 MCHHHRTSHIRHLAENECHIMHLDSEKKPKKLGVGDENMNKKKYVSVNPRHCTLNVASQSSLPKSIVYAAKLHTLIILSEYSSVDSTNLAILLSHMRRLRALGLSSCSIKELPRSVGELLHLRYLDLSFNQDLKKLPQAICNLLNLQTLNLNGCRSLQKLPKGIRKLSKLRHLEILWTLSLTYLPKGIASLTSLRTLIRFLGNSGPSSKACNLGDDGELNQVQGSIIIDGLGGETNALDAKKANLKSKKDLLGLELRFSAVGSDSNHKDELPKKNKDILEALEAPAELQGLGIFYYQGESFPKWMIALQNLTHLLLADCSNCSVLPPLGKLLSLQSLKIQNMANVEKVGLEFLGIESNNDDDVQEDSFPKLQELCFQDMDNWEDWIGIS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151303g00006 389 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 50 386 - -
Stsc151303g00006 389 Pfam Leucine rich repeat 97 155 IPR001611 GO:0005515
Stsc151303g00006 389 Gene3D Ribonuclease Inhibitor 240 387 IPR032675 -
Stsc151303g00006 389 Gene3D Ribonuclease Inhibitor 46 206 IPR032675 -
Stsc151303g00006 389 SUPERFAMILY L domain-like 48 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151303g00006 Stsc-Chr151303 42022 43191 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151303g00006 99 198 WRKY Transcription Factor Family AT4G12020 38.000 2.64e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151303g00006 - - aip:107625957 422.935