Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151301g00006 ATGCAAAATTCAAACGCTTCGCCGTCGTCTCCGGCGGCCGTGGACACGGCGCCGTTTCTCCTCCGAAGCCGCCGCTTCCTCCGCCGCACGCCGCCTCCACTTCGTACGGCTGCTCGTCTCTTCCGTCAGGCATCAGGGCGGAGAATGATGCTCCGGGAACCGTCCGTTCGGGTCCGGGAGGCTGCGGCAGCGGAGCTCGAGGGGCGGCAGAGCGACTGGGCCTACTCGAAACCGGTGGTGGTGGTGGACGTGCTTTGGAACCTGGCGGTGGCTCTTGTTGGGGCGGCGGTGCTGTGCATCAGCACGAAAGAGGATCCATGTGTTCCCTTGAGGGTGTGGATTGTTGGATATTTTTTGCAAGGTTTGATTCATTCTCTGTGTGTGGTTGTGGAGTACAGGAAGAGGAGGAGAGTGAGGAGGAGTCAAGATGGTTCTGGTTCTTCTAATGGTGGTGGTGGTGGTGATAGGGAATGGAGTTTCAGCTCTGAGAGTGATGATTTGGATTATGATAATGTTGAGCGTTTGCTGCACACTGAGGAGAACAGCATCACGAAGCATGTTGAGTCAGCAAATACCATGCTTTCATTCATATGGTGGGTCATTGGATTCTATTGGGTAACTGCCGGTGGCCAGAATTTAACGAGGGAGTCACCTCAGCTTTATTGGATCTGCATTACATTCCTTGCTTTTGACGTTGTGATTGTTCTCATCTGTGTTGCTGTTGCATGTCTGATTGGTATTGCTGTTTGCTGTTGCCTGCCATGCATACTCGCTATCTTGTATGTCGTAGCAGATCAGGAAGGGGCAACCAAGGAAGAAATTGAGCAGTTGCCAAAATACAAGTTCAGAGTGATAAAGGAATCTAAGAAAGAAGATGATATTCCAGAATCTTCGAAAGGAATAATGATGCAATGTGACAGCGACGCAACTGCTGAACATGCTATTGCCTTAGAAGATGCAGAATGCTGCATCTGCCTTTCTGCCTATGATGATGGTGCTGAACTCAGAGAACTTCCATGCAACCACCACTTCCATTGCACGTGCATCGACAAATGGCTGCTTCTAAATGCTACATGTCCTCTGTGCAAGTTCAACATCTTAAGGTCTAGTAATCACCATCAAGAAGTTTGA 1131 0.5004 MQNSNASPSSPAAVDTAPFLLRSRRFLRRTPPPLRTAARLFRQASGRRMMLREPSVRVREAAAAELEGRQSDWAYSKPVVVVDVLWNLAVALVGAAVLCISTKEDPCVPLRVWIVGYFLQGLIHSLCVVVEYRKRRRVRRSQDGSGSSNGGGGGDREWSFSSESDDLDYDNVERLLHTEENSITKHVESANTMLSFIWWVIGFYWVTAGGQNLTRESPQLYWICITFLAFDVVIVLICVAVACLIGIAVCCCLPCILAILYVVADQEGATKEEIEQLPKYKFRVIKESKKEDDIPESSKGIMMQCDSDATAEHAIALEDAECCICLSAYDDGAELRELPCNHHFHCTCIDKWLLLNATCPLCKFNILRSSNHHQEV 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151301g00006 376 PANTHER TARGET OF ERK KINASE MPK-1 41 367 - -
Stsc151301g00006 376 ProSiteProfiles Zinc finger RING-type profile. 322 363 IPR001841 -
Stsc151301g00006 376 SUPERFAMILY RING/U-box 312 369 - -
Stsc151301g00006 376 SMART ring_2 322 362 IPR001841 -
Stsc151301g00006 376 Pfam Ring finger domain 321 363 IPR001841 -
Stsc151301g00006 376 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 299 370 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151301g00006 Stsc-Chr151301 53673 56894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151301g00006 6 373 C3H Transcription Factor Family AT1G68070 47.439 8.89e-117 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151301g00006 - - gmx:100795425 532.332