Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151300g00008 ATGAATCCCCACCTCCCTCACCATCTCTCCTCCATTTCTCTCTTCTTCTCCTTCTTCTTCTTCTTCTGCACAGCAACAACCTATTCCCACAGTTCTTGCTCATCCACAAAAACCCCATGTCCCCCATTCCCTGCCACGTCACCCTTACCCTTCCCATTCTCCTCTTCCCCAGGCTGCGGCCACCCTTCCTTCCAACTCCACTGCTCCACCCCCTACTCCTTCATCTCCATCAACAACTTCACCTTCTCCCTCCTCTCCTACAAACCCAACACTTCCTCCATTATCCTCTCCCCTCACAACAATAATCACACTTCATCATCATCATCATCATCATCATGCCCTTCATCTTCCCACTTCCTCTCCATTCCCAACCAACCCATTAACCTCTCTTCCTCCCCTTTCAGAGTCTCAGACGCTTCATGTGCCCGCCTCTTCTTCCTCCACCCATGTTCCCCACCAACTAACTGCAACCGCTGCTCTTGGCAATGCAACCTCATCAACAACCCCAACCACCTCCTCCCTGACTGCGGACCCATGCACCGCTCTGCTTCCGATTCCGAACCTACCTGCCAAACCGACACCTTAGGCTACCTCGACAAGATGCTTTCTTTCTCCGGGATCGAACTCCAATGGGACCAATCTCAAGACCCTTACTTCTCCAGCTGCAAACAATGCCGAGGCTTCTGCGGATTCAACACTTCAGACCCTAACAACAACTTCATCTGCTTCCATTCTCAGTCCACCATCTCCCCGCCGTGGATCCCCAAGGCCAAGTTCATCAAGGCAAACAGAACCGCTGTGTTTACCCTCGCCGTTGCGTTGACCATGTTGTTGATTGTTGTATCTATCGTCGCGTTTATTAAGAGGAATGCTGCTACGTGGAAGCAGCGCCCATTCTCGGAGGAAGATCCCACCGCCGTGTTCCTCCGCAATAACCGCAGCCTCCTCCCTCCGGTATTCACCTACGAAGAGCTTGAATCCTCCACCAACGGATTCGACCCCAAGCGCAAGATCGGCGACGGCGGGTTCGGCTCCGTCTACCTCGGCCAACTCCGTGACGGGAGATTCGTCGCCGTGAAACACCTCCACCACCACCACAGCGCCGCTGCCGGAAAAGCGTTCTCATCGAAGTCGTTCTGCAACGAGATCCTCATCCTCTCTACCATAAACCACCCCAACCTCGTGAAGCTCCATGGCTACTGCAGTGACCCGAAAGGGTTGCTTCTGGTCTACGACTACGTCCCGAACGGCACCCTGGCCGACCATCTCCATGGGCGCAATAACAGAAAAGCACATCTGAAATGGAAGGTAAGGTTAGAGATGGCGCTGCAAATTGCAACGGCAATGGAGTACCTTCACTTTGCGGTGGTGCCGCCGGTGGTTCATAGAGATATAACTACTTCCAACATCTTTGTGGAGAAGGATATGAGGGTAAAGGTCGGTGACTTCGGTCTCTCGAGGCTTCTGGTGTTGCAAGACAAAACGGCGTCGTCCACGGGCTCAACGACAACCACCGGGAACAACGGGTGCGTATGGACGGGTCCGCAAGGTACGCCAGGCTATTTGGACCCGGATTACCACCGGTCGTTCCGGTTAACCGAGAAGAGTGACGTGTACAGCTTTGGCGTTGTGCTTCTTGAACTGATTTCGGGGCTCAGGGCGGTGGATGCAAAGAGGGACAAGAGAGAGATGGCGCTGGCTGATATGGTGGTTTCCAGGATCCAGATGGGGCAGTTAGACGAGGTGGTGGACCCCGTTCTTGCGGCGGAGGAGAAGGCCGTCGGGGACGCTGTTGCCGCCGTGGCGGAGCTTGCGTTCCGATGCGTGGCGGCGGAGAAAGATGACCGGCCCGATTCGAAGGAGGTTGTGCAGGAGCTAAGAAGAGTGAGGGGCCGTGCTGACGTGGCAAGGGAGTGA 1917 0.5498 MNPHLPHHLSSISLFFSFFFFFCTATTYSHSSCSSTKTPCPPFPATSPLPFPFSSSPGCGHPSFQLHCSTPYSFISINNFTFSLLSYKPNTSSIILSPHNNNHTSSSSSSSSCPSSSHFLSIPNQPINLSSSPFRVSDASCARLFFLHPCSPPTNCNRCSWQCNLINNPNHLLPDCGPMHRSASDSEPTCQTDTLGYLDKMLSFSGIELQWDQSQDPYFSSCKQCRGFCGFNTSDPNNNFICFHSQSTISPPWIPKAKFIKANRTAVFTLAVALTMLLIVVSIVAFIKRNAATWKQRPFSEEDPTAVFLRNNRSLLPPVFTYEELESSTNGFDPKRKIGDGGFGSVYLGQLRDGRFVAVKHLHHHHSAAAGKAFSSKSFCNEILILSTINHPNLVKLHGYCSDPKGLLLVYDYVPNGTLADHLHGRNNRKAHLKWKVRLEMALQIATAMEYLHFAVVPPVVHRDITTSNIFVEKDMRVKVGDFGLSRLLVLQDKTASSTGSTTTTGNNGCVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLRAVDAKRDKREMALADMVVSRIQMGQLDEVVDPVLAAEEKAVGDAVAAVAELAFRCVAAEKDDRPDSKEVVQELRRVRGRADVARE 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151300g00008 638 Pfam Protein tyrosine and serine/threonine kinase 335 626 IPR001245 GO:0004672|GO:0006468
Stsc151300g00008 638 SUPERFAMILY Protein kinase-like (PK-like) 310 626 IPR011009 -
Stsc151300g00008 638 Gene3D Transferase(Phosphotransferase) domain 1 414 635 - -
Stsc151300g00008 638 ProSitePatterns Tyrosine protein kinases specific active-site signature. 460 472 IPR008266 GO:0004672|GO:0006468
Stsc151300g00008 638 ProSiteProfiles Protein kinase domain profile. 332 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151300g00008 638 Gene3D Phosphorylase Kinase; domain 1 310 413 - -
Stsc151300g00008 638 FunFam Putative serine/threonine-protein kinase At1g18390 family 309 413 - -
Stsc151300g00008 638 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Stsc151300g00008 638 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 12 632 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151300g00008 Stsc-Chr151300 56722 59342 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151300g00008 40 638 Receptor kinase-like Gene Family AT1G69910 59.578 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Stsc151300g00008 PK_Tyr_Ser-Thr 3.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151300g00008 - - qsa:O6P43_033079 753.051